ggKbase home page

SR2-18-B1_coassembly_129179

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_129179_1
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

comp(3..1154)
-----------------
DNA (1152bp)
protein (384aa)
Monosaccharide-transporting ATPase {ECO:0000256|SAAS:SAAS00041637}; EC=3.6.3.17 {ECO:0000256|SAAS:SAAS00041637};; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 /; STL-6-O1).;"
Ribose ABC transporter ATP-binding protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I684_CALAS
rbsA; ribose ABC transporter ATP-binding protein
SR2-18-B1_coassembly_129179_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1223..2605)
-----------------
DNA (1383bp)
protein (461aa)
primary replicative DNA helicase (EC:3.6.1.-)
Primary replicative DNA helicase {ECO:0000313|EMBL:ABJ88751.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABJ88751.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000363532D
SR2-18-B1_coassembly_129179_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2744..6010)
-----------------
DNA (3267bp)
protein (1089aa)
Acriflavin resistance protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025G5_SOLUE
acriflavin resistance protein
Acriflavin resistance protein {ECO:0000313|EMBL:ABJ83354.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_129179_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(6000..7223)
-----------------
DNA (1224bp)
protein (408aa)
Cation/multidrug efflux pump n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIA4_CHLTF
cation/multidrug efflux pump
Cation/multidrug efflux pump {ECO:0000313|EMBL:AEP11562.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SR2-18-B1_coassembly_129179_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(7242..8447)
-----------------
DNA (1206bp)
protein (402aa)
RND family efflux transporter, MFP subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LIA2_CHLTF
RND family efflux transporter MFP subunit
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:AEP11560.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
SR2-18-B1_coassembly_129179_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(8444..9016)
-----------------
DNA (573bp)
protein (191aa)
Transcriptional regulator, TetR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BZ3_SOLUE
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABJ81423.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_129179_7
unknown

Not on your lists

comp(9184..9612)
-----------------
DNA (429bp)
protein (143aa)

This feature has no annotations

SR2-18-B1_coassembly_129179_8
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9666..10589
-----------------
DNA (924bp)
protein (308aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01R01_SOLUE
xylose isomerase domain-containing protein
Tax=RBG_16_Planctomycetes_64_12_curated
SR2-18-B1_coassembly_129179_9
GWF2_Verrucomicrobia_62_7_curated, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10582..10971
-----------------
DNA (390bp)
protein (130aa)
alkylhydroperoxidase n=1 Tax=Pseudomonas fluorescens RepID=UPI00031A3545
alkylhydroperoxidase
Tax=GWF2_Verrucomicrobia_62_7_curated
SR2-18-B1_coassembly_129179_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(11117..12199)
-----------------
DNA (1083bp)
protein (361aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase (GDP) {ECO:0000313|EMBL:ABJ85512.1}; EC=2.7.7.22 {ECO:0000313|EMBL:ABJ85512.1};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Mannose-1-phosphate guanylyltransferase (GDP) n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XV3_SOLUE
SR2-18-B1_coassembly_129179_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(12200..13012)
-----------------
DNA (813bp)
protein (271aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Signal peptidase I. Serine peptidase. MEROPS family S26A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XV4_SOLUE
SR2-18-B1_coassembly_129179_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13014..13847)
-----------------
DNA (834bp)
protein (278aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Signal peptidase I. Serine peptidase. MEROPS family S26A n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XV4_SOLUE
SR2-18-B1_coassembly_129179_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13853..15163)
-----------------
DNA (1311bp)
protein (437aa)
TonB family protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020P5_SOLUE
TonB family protein
TonB family protein {ECO:0000313|EMBL:ABJ84599.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_129179_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15287..16108
-----------------
DNA (822bp)
protein (274aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CY4_SOLUE
uroporphyrin-III C/tetrapyrrole methyltransferase
SR2-18-B1_coassembly_129179_15
Legionella norrlandica, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16105..16374)
-----------------
DNA (270bp)
protein (90aa)
hypothetical protein n=1 Tax=Legionella tunisiensis RepID=UPI00030DCC71
ArsR family transcriptional regulator {ECO:0000313|EMBL:KGP63168.1}; TaxID=1498499 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella norrlandica.;"
regulatory protein ArsR
SR2-18-B1_coassembly_129179_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16491..17324)
-----------------
DNA (834bp)
protein (278aa)
Ribosomal large subunit pseudouridine synthase B (EC:4.2.1.70)
PREDICTED: probable H/ACA ribonucleoprotein complex subunit 1-like n=1 Tax=Ceratitis capitata RepID=UPI00032A072E
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
SR2-18-B1_coassembly_129179_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(17401..17850)
-----------------
DNA (450bp)
protein (150aa)
ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZL3_SOLUE
ATP-dependent carboxylate-amine ligase domain-containing protein
ATP-dependent carboxylate-amine ligase domain protein, ATP-grasp {ECO:0000313|EMBL:ABJ84902.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 17 items

View Taxonomy