ggKbase home page

SR2-18-B1_coassembly_87951

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_87951_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2..568
-----------------
DNA (567bp)
protein (189aa)
Carbohydrate kinase, FGGY n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021J2_SOLUE
carbohydrate kinase
Carbohydrate kinase, FGGY {ECO:0000313|EMBL:ABJ84397.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_87951_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(588..1214)
-----------------
DNA (627bp)
protein (209aa)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036CF955
SR2-18-B1_coassembly_87951_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(1275..1748)
-----------------
DNA (474bp)
protein (158aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZP9_SOLUE
BadM/Rrf2 family transcriptional regulator
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ABJ84866.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_87951_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1936..3606)
-----------------
DNA (1671bp)
protein (557aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9EGY3_9CYAN
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
SR2-18-B1_coassembly_87951_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(3629..4405)
-----------------
DNA (777bp)
protein (259aa)
histidinol-phosphate phosphatase (EC:3.1.3.15)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C9295
Tax=RBG_16_Acidobacteria_70_10_curated
SR2-18-B1_coassembly_87951_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

4504..6318
-----------------
DNA (1815bp)
protein (605aa)
AMP-dependent synthetase and ligase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PR8_SOLUE
AMP-dependent synthetase/ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABJ88352.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_87951_7
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(6327..7277)
-----------------
DNA (951bp)
protein (317aa)
Uncharacterized protein n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZZI3_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EAQ78071.1}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
signal peptide-domain containing protein
SR2-18-B1_coassembly_87951_8
Coraliomargarita sp. CAG:312, Coraliomargarita, Puniceicoccales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

7504..7962
-----------------
DNA (459bp)
protein (153aa)
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1262865 species="Bacteria; Verrucomicrobia; Opitutae; Puniceicoccales; Puniceicoccaceae; Coraliomargarita; environmental samples.;" source="Coraliomargarita sp. CAG:312.;"
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Coraliomargarita sp. CAG:312 RepID=R7L9C0_9BACT
phosphoribosylaminoimidazole carboxylase catalytic subunit
SR2-18-B1_coassembly_87951_9
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8010..8570)
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NKN2_9SPHI
PadR family transcriptional regulator
PadR family transcriptional regulator {ECO:0000313|EMBL:AHF14629.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SR2-18-B1_coassembly_87951_10
unknown

Not on your lists

8661..9407
-----------------
DNA (747bp)
protein (249aa)

This feature has no annotations

SR2-18-B1_coassembly_87951_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

9418..9966
-----------------
DNA (549bp)
protein (183aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024H9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83597.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_87951_12
GWA2_Deltaproteobacteria_65_63_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10285..11676)
-----------------
DNA (1392bp)
protein (464aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
Sensor histidine kinase response regulator, PAS, GAF and PAS domain-containing id=3003650 bin=GWA2_Deltaproteo_65_63 species=ACD39 genus=ACD39 taxon_order=ACD39 taxon_class=ACD39 phylum=unknown tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
Tax=GWA2_Deltaproteobacteria_65_63_curated
Displaying 12 items

View Taxonomy