ggKbase home page

SR2-18-B1_coassembly_172931

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_172931_1
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6..1163)
-----------------
DNA (1158bp)
protein (386aa)
LuxR family transcriptional regulator n=1 Tax=Methyloversatilis universalis RepID=UPI0003785CF1
Transcriptional regulator, LuxR family protein {ECO:0000313|EMBL:EEB78997.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
transcriptional regulator
SR2-18-B1_coassembly_172931_2
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1385..1924
-----------------
DNA (540bp)
protein (180aa)
RNA polymerase sigma-E factor, putative n=1 Tax=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) RepID=B5Y6J6_COPPD
RNA polymerase subunit sigma-24
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AKD05755.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
SR2-18-B1_coassembly_172931_3
unknown

Not on your lists

comp(2051..2296)
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

SR2-18-B1_coassembly_172931_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(2293..4485)
-----------------
DNA (2193bp)
protein (731aa)
TPR repeat-containing protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CT0_SOLUE
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ABJ81136.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_172931_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(4475..6976)
-----------------
DNA (2502bp)
protein (834aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] id=14425647 bin=bin1_lowGC species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
AMP-dependent synthetase/ligase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
SR2-18-B1_coassembly_172931_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6988..7584)
-----------------
DNA (597bp)
protein (199aa)
AAA ATPase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VK5_SOLUE
ATPase AAA
AAA ATPase {ECO:0000313|EMBL:ABJ86310.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying 6 items

View Taxonomy