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SR2-18-B1_coassembly_421519

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-B1_coassembly_421519_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3..407
-----------------
DNA (405bp)
protein (135aa)
Type III secretion system inner membrane R protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP9_SOLUE
type III secretion system inner membrane R protein
Type III secretion system inner membrane R protein {ECO:0000313|EMBL:ABJ88371.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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417..1484
-----------------
DNA (1068bp)
protein (356aa)
Type III secretion exporter n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP8_SOLUE
type III secretion exporter
Type III secretion exporter {ECO:0000313|EMBL:ABJ88372.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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1533..3698
-----------------
DNA (2166bp)
protein (722aa)
Flagellar biosynthesis protein FlhA n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP7_SOLUE
flagellar biosynthesis protein FlhA
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ABJ88373.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3740..4852
-----------------
DNA (1113bp)
protein (371aa)
GTP-binding signal recognition particle SRP54, G-domain n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP6_SOLUE
GTP-binding signal recognition particle
GTP-binding signal recognition particle SRP54, G-domain {ECO:0000313|EMBL:ABJ88374.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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4875..5627
-----------------
DNA (753bp)
protein (251aa)
RNA polymerase sigma factor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP5_SOLUE
FliA/WhiG family RNA polymerase sigma factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_6
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5640..6443
-----------------
DNA (804bp)
protein (268aa)
Flagellar motor switch protein FliN n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP4_SOLUE
flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ABJ88376.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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6509..6895
-----------------
DNA (387bp)
protein (129aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01PP3_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88377.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_8
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(6946..7866)
-----------------
DNA (921bp)
protein (307aa)
PDZ/DHR/GLGF domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK0_SOLUE
PDZ/DHR/GLGF domain-containing protein
PDZ/DHR/GLGF domain protein {ECO:0000313|EMBL:ABJ86670.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7962..9041)
-----------------
DNA (1080bp)
protein (360aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ86669.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(9045..9968)
-----------------
DNA (924bp)
protein (308aa)
Putative transmembrane anti-sigma factor n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK2_SOLUE
transmembrane anti-sigma factor
Putative transmembrane anti-sigma factor {ECO:0000313|EMBL:ABJ86668.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(9965..10534)
-----------------
DNA (570bp)
protein (190aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01UK3_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ86667.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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10718..13198
-----------------
DNA (2481bp)
protein (827aa)
alpha-glucuronidase (EC:3.2.1.139)
Xylan alpha-1,2-glucuronidase {ECO:0000256|RuleBase:RU361198}; EC=3.2.1.131 {ECO:0000256|RuleBase:RU361198};; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Alpha-glucuronidase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q024C1_SOLUE
SR2-18-B1_coassembly_421519_13
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(13205..14227)
-----------------
DNA (1023bp)
protein (341aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI0003668261
uroporphyrinogen decarboxylase
Tax=GWC2_Ignavibacteria_rel_36_12_curated
SR2-18-B1_coassembly_421519_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(14253..15977)
-----------------
DNA (1725bp)
protein (575aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036697AE
30S ribosomal protein S1
SSU ribosomal protein S1P {ECO:0000313|EMBL:ABJ82905.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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16071..17345
-----------------
DNA (1275bp)
protein (425aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Signal transduction histidine kinase, nitrogen specific, NtrB n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027A2_SOLUE
signal transduction histidine kinase nitrogen specific NtrB
SR2-18-B1_coassembly_421519_16
Faecalibacterium sp. CAG:74, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17500..17838
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:74 RepID=R7IBF6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE48920.1}; TaxID=1262897 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:74.;"
winged helix family two component transcriptional regulator
SR2-18-B1_coassembly_421519_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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17918..19294
-----------------
DNA (1377bp)
protein (459aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027A1_SOLUE
Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABJ82912.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR2-18-B1_coassembly_421519_18
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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19344..20615
-----------------
DNA (1272bp)
protein (424aa)
Putative LmbE-like protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KVE1_SOLCM id=5224387 bin=16ft_combo_ws3_JS1 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
Displaying 18 items

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