ggKbase home page

SR2-18-Sp2_coassembly_scaffold_287409

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-Sp2_coassembly_scaffold_287409_1
GWC2_OP11_45_19, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(439..1032)
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU02924.1}; TaxID=1618366 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC2_45_19.;"
SR2-18-Sp2_coassembly_scaffold_287409_2
Microgenomates bacterium GW2011_GWB1_44_8, Microgenomates, Bacteria

Not on your lists

comp(1029..1481)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KKT77137.1}; TaxID=1618505 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_44_8.;"
Uncharacterized protein id=15191263 bin=GWC1_OP11_49_16_COMPLETE species=RAAC19 genus=RAAC19 taxon_order=RAAC19 taxon_class=RAAC19 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
polymorphic outer membrane protein
SR2-18-Sp2_coassembly_scaffold_287409_3
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

1528..1953
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS33097.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
SR2-18-Sp2_coassembly_scaffold_287409_4
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

1966..6015
DNA (4050bp) protein (1350aa)
Replicative DNA helicase n=1 Tax=Nostoc sp. PCC 7107 RepID=K9QGP4_9NOSO
replicative DNA helicase
Replicative DNA helicase {ECO:0000313|EMBL:AFY44254.1}; TaxID=317936 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
SR2-18-Sp2_coassembly_scaffold_287409_5
GWB1_OP11_41_10, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(5978..6421)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR87985.1}; TaxID=1618577 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_41_10.;"
SR2-18-Sp2_coassembly_scaffold_287409_6
unknown

Not on your lists

comp(6418..6858)
DNA (441bp) protein (147aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_287409_trna_1
unknown

Not on your lists

comp(6816..6900)
DNA (85bp)
transferRNA Leu
SR2-18-Sp2_coassembly_scaffold_287409_7
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

7121..7399
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ37309.1}; TaxID=1618481 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
seg 86..98 id=3574 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
SR2-18-Sp2_coassembly_scaffold_287409_8
Microgenomates bacterium GW2011_GWC1_47_20, Microgenomates, Bacteria

Not on your lists

7414..7974
DNA (561bp) protein (187aa)
Translation elongation factor P {ECO:0000313|EMBL:KKU68771.1}; TaxID=1618529 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_47_20.;"
efp; elongation factor P; K02356 elongation factor EF-P id=75403 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
translation elongation factor P
SR2-18-Sp2_coassembly_scaffold_287409_9
GWC2_OP11_45_19, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(7967..8428)
DNA (462bp) protein (154aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU02931.1}; TaxID=1618366 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC2_45_19.;"
seg 55..72 id=6805 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
SR2-18-Sp2_coassembly_scaffold_287409_10
R_OP11_Amesbacteria_48_32, Amesbacteria, Microgenomates, Bacteria

Not on your lists

8446..9027
DNA (582bp) protein (194aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32_curated
SR2-18-Sp2_coassembly_scaffold_287409_11
GWA2_OP11_47_70_partial, Amesbacteria, Microgenomates, Bacteria

Not on your lists

8997..9383
DNA (387bp) protein (129aa)
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:KKU78700.1}; TaxID=1618359 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_47_70.;"
hypothetical protein id=75402 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
DnaK suppressor protein
SR2-18-Sp2_coassembly_scaffold_287409_12
Microgenomates bacterium GW2011_GWB1_44_8, Microgenomates, Bacteria

Not on your lists

9350..9799
DNA (450bp) protein (150aa)
S23 ribosomal protein n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E8V5_FLESM
S23 ribosomal protein {ECO:0000313|EMBL:KKT76984.1}; TaxID=1618505 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_44_8.;"
S23 ribosomal protein
SR2-18-Sp2_coassembly_scaffold_287409_13
GWC2_OD1_41_11, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

9802..10506
DNA (705bp) protein (235aa)
Serine/threonine protein kinase involved in cell cycle control n=1 Tax=Pantoea sp. YR343 RepID=J3HST0_9ENTR
RIO-type serine/threonine protein kinase {ECO:0000313|EMBL:KKR87388.1}; TaxID=1618985 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWC2_41_11.;"
kinase
SR2-18-Sp2_coassembly_scaffold_287409_14
GWA2_OP11_42_12, Amesbacteria, Microgenomates, Bacteria

Not on your lists

10529..11239
DNA (711bp) protein (237aa)
ribosomal large subunit pseudouridine synthase D; K06180 ribosomal large subunit pseudouridine synthase D [EC:5.4.99.12] id=75401 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
Pseudouridine synthase {ECO:0000313|EMBL:KKS33090.1}; TaxID=1618356 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWA2_42_12.;"
RluA family pseudouridine synthase
SR2-18-Sp2_coassembly_scaffold_287409_15
GWC2_OP11_45_19, Amesbacteria, Microgenomates, Bacteria

Not on your lists

11244..12869
DNA (1626bp) protein (542aa)
Sodium/hydrogen exchanger {ECO:0000313|EMBL:KKU02935.1}; TaxID=1618366 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC2_45_19.;"
sodium/hydrogen exchanger id=41178 bin=ACD37 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=ACD37 organism_group=OP11 (Microgenomates) organism_desc=OP11
Transporter, CPA2 family
SR2-18-Sp2_coassembly_scaffold_287409_16
R_OP11_Amesbacteria_48_32b, Amesbacteria, Microgenomates, Bacteria

Not on your lists

12886..13632
DNA (747bp) protein (249aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32b_curated
SR2-18-Sp2_coassembly_scaffold_287409_17
Microgenomates bacterium GW2011_GWB1_44_8, Microgenomates, Bacteria

Not on your lists

comp(13618..14358)
DNA (741bp) protein (247aa)
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:KKT77151.1}; TaxID=1618505 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_44_8.;"
TPR repeat-containing protein id=6818 bin=ACD13 species=ACD13 genus=ACD13 taxon_order=ACD13 taxon_class=ACD13 phylum=OP11 tax=ACD13 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_287409_18
RLO_WWE3_36_10, WWE3, Bacteria

Not on your lists

14376..14882
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DR39_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_WWE3_36_10_curated
SR2-18-Sp2_coassembly_scaffold_287409_19
GWB1_OP11_48_13, Amesbacteria, Microgenomates, Bacteria

Not on your lists

14875..15639
DNA (765bp) protein (255aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU97074.1}; TaxID=1618362 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_48_13.;"
Uncharacterized protein id=15191276 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
SR2-18-Sp2_coassembly_scaffold_287409_20
unknown

Not on your lists

15640..15882
DNA (243bp) protein (81aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_287409_21
GWB1_OP11_47_26, Amesbacteria, Microgenomates, Bacteria

Not on your lists

16279..17223
DNA (945bp) protein (315aa)
Tyrosine recombinase XerC {ECO:0000313|EMBL:KKU74917.1}; TaxID=1618361 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_47_26.;"
hypothetical protein id=5801201 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
integrase family protein
SR2-18-Sp2_coassembly_scaffold_287409_22
GWB1_OP11_38_8, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(17244..17834)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1XCU9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKQ85205.1}; TaxID=1618570 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_8.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_287409_23
R_OP11_Amesbacteria_48_32, Amesbacteria, Microgenomates, Bacteria

Not on your lists

17947..18894
DNA (948bp) protein (316aa)
D-ala D-ala ligase C-terminus family n=1 Tax=uncultured bacterium RepID=K2AKY3_9BACT
D-alanine--D-alanine ligase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Amesbacteria_48_32_curated
SR2-18-Sp2_coassembly_scaffold_287409_24
GWB1_OP11_47_26, Amesbacteria, Microgenomates, Bacteria

Not on your lists

18875..19924
DNA (1050bp) protein (350aa)
D-ala D-ala ligase C-terminus family n=1 Tax=uncultured bacterium RepID=K2BDM2_9BACT
D-alanine-D-alanine ligase {ECO:0000313|EMBL:KKU74913.1}; TaxID=1618361 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWB1_47_26.;"
D-alanine-D-alanine ligase-like protein
SR2-18-Sp2_coassembly_scaffold_287409_25
Microgenomates bacterium GW2011_GWC1_46_20, Microgenomates, Bacteria

Not on your lists

comp(19909..20607)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CUH2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU29008.1}; TaxID=1618528 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_46_20.;"
hypothetical protein
SR2-18-Sp2_coassembly_scaffold_287409_26
unknown

Not on your lists

comp(20716..21264)
DNA (549bp) protein (183aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_287409_27
Microgenomates bacterium GW2011_GWC1_46_20, Microgenomates, Bacteria

Not on your lists


comp(21251..23722)
DNA (2472bp) protein (824aa)
gyrA; DNA gyrase subunit A (EC:5.99.1.3); K02469 DNA gyrase subunit A [EC:5.99.1.3] id=5085041 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
Gyrase subunit A protein {ECO:0000313|EMBL:KKU29005.1}; TaxID=1618528 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_46_20.;"
SR2-18-Sp2_coassembly_scaffold_287409_28
Candidatus Saccharibacteria bacterium RAAC3_TM7_1, Candidatus Saccharibacteria, Bacteria

Not on your lists

comp(23695..24207)
DNA (513bp) protein (171aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1394711 species="Bacteria; Candidatus Saccharibacteria.;" source="Candidatus Saccharibacteria bacterium RAAC3_TM7_1.;"
Inorganic pyrophosphatase
Inorganic pyrophosphatase id=5226772 bin=RAAC3_TM7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=RAAC3_TM7 organism_group=TM7
SR2-18-Sp2_coassembly_scaffold_287409_29
GWC2_OP11_47_8, Amesbacteria, Microgenomates, Bacteria

Not on your lists

comp(24218..24634)
DNA (417bp) protein (139aa)
syn:sll2005 gyrB; DNA gyrase B subunit; K02470 DNA gyrase subunit B [EC:5.99.1.3] id=68136 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA gyrase subunit B (EC:5.99.1.3)
Gyrase subunit B protein {ECO:0000313|EMBL:KKU83329.1}; TaxID=1618367 species="Bacteria; Microgenomates.;" source="Microgenomates (Amesbacteria) bacterium GW2011_GWC2_47_8.;"
Displaying items 1-30 of 50 in total

View Taxonomy