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SR2-18-Sp2_coassembly_scaffold_416147

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Displaying 14 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-Sp2_coassembly_scaffold_416147_1
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

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comp(216..800)
DNA (585bp) protein (195aa)
seg id=5095709 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
SR2-18-Sp2_coassembly_scaffold_416147_2
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

1219..2133
DNA (915bp) protein (305aa)
rimK1; ribosomal protein S6 modification protein; K05844 ribosomal protein S6 modification protein id=5095708 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
alpha-L-glutamate ligase
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
SR2-18-Sp2_coassembly_scaffold_416147_3
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(2156..2443)
DNA (288bp) protein (96aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=5802284 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
SR2-18-Sp2_coassembly_scaffold_416147_4
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(2444..2800)
DNA (357bp) protein (119aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] id=73590 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
Clp protease
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
SR2-18-Sp2_coassembly_scaffold_416147_5
CG_PER_02, Peregrinibacteria, Bacteria

Not on your lists

2998..6837
DNA (3840bp) protein (1280aa)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] id=5098435 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
phosphoribosylformylglycinamidine synthase (EC:6.3.5.3)
Tax=CG_PER_02
SR2-18-Sp2_coassembly_scaffold_416147_6
unknown

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6834..7136
DNA (303bp) protein (101aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_416147_7
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

comp(7164..9365)
DNA (2202bp) protein (734aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A7Z3_9BACT
ftsK; cell division protein ftsK
Tax=BJP_IG2102_PER_44_74
SR2-18-Sp2_coassembly_scaffold_416147_8
BJP_IG2102_PER_44_74, Peregrinibacteria, Bacteria

Not on your lists

10064..10948
DNA (885bp) protein (295aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1YUS0_9BACT
Tax=BJP_IG2102_PER_44_74
SR2-18-Sp2_coassembly_scaffold_416147_9
unknown

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10950..11237
DNA (288bp) protein (96aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_416147_10
unknown

Not on your lists

11234..11449
DNA (216bp) protein (72aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_416147_11
PER_GWF2_38_29, Peregrinibacteria, Bacteria

Not on your lists

11463..12164
DNA (702bp) protein (234aa)
transmembrane_regions id=5096035 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KKQ68197.1}; TaxID=1619066 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_38_29.;"
PHP domain-containing protein
SR2-18-Sp2_coassembly_scaffold_416147_12
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

12166..12660
DNA (495bp) protein (165aa)
id=5096221 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
SR2-18-Sp2_coassembly_scaffold_416147_13
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

12657..13796
DNA (1140bp) protein (380aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] id=5093768 bin=PER_GWE2_39_6 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
ackA; acetate kinase (EC:2.7.2.1)
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
SR2-18-Sp2_coassembly_scaffold_416147_14
R_Peregrinibacteria_39_12, Peregrinibacteria, Bacteria

Not on your lists

comp(13791..15803)
DNA (2013bp) protein (671aa)
seg id=5802772 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
Tax=RIFCSPLOWO2_01_FULL_Peregrinibacteria_39_12_curated
Displaying 14 items

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