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SR2-18-Sp2_coassembly_scaffold_572783

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-Sp2_coassembly_scaffold_572783_1
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(3..203)
DNA (201bp) protein (67aa)
GTPase domain-containing protein; K06942 id=5042272 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
translation-associated GTPase
Tax=RBG_13_Pacearchaeota_36_9_curated
SR2-18-Sp2_coassembly_scaffold_572783_2
unknown

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451..1464
DNA (1014bp) protein (338aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_572783_3
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

2249..3670
DNA (1422bp) protein (474aa)
peptidase U62 modulator of DNA gyrase; K03568 TldD protein id=5046351 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
TldD-like protein
Tax=CG_Pacearch_04
SR2-18-Sp2_coassembly_scaffold_572783_4

Not on your lists

3672..4994
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HLI3_PYRSN
PmbA protein {ECO:0000313|EMBL:KHO52469.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
zinc-dependent protease
SR2-18-Sp2_coassembly_scaffold_572783_5
unknown

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comp(5166..5627)
DNA (462bp) protein (154aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_572783_trna_1
unknown

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comp(6199..6283)
DNA (85bp)
transferRNA Thr
SR2-18-Sp2_coassembly_scaffold_572783_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(6567..7106)
DNA (540bp) protein (180aa)
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
SR2-18-Sp2_coassembly_scaffold_572783_7
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(7060..7497)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UYJ0_PYRAB
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
SR2-18-Sp2_coassembly_scaffold_572783_8
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

7650..8195
DNA (546bp) protein (182aa)
XRE family transcriptional regulator id=5044639 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative transcription regulator, containing CBS protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
SR2-18-Sp2_coassembly_scaffold_572783_9

Not on your lists

comp(8192..8548)
DNA (357bp) protein (119aa)
truD; tRNA pseudouridine synthase D; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5042278 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO46776.1}; EC=5.4.99.27 {ECO:0000313|EMBL:KHO46776.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
SR2-18-Sp2_coassembly_scaffold_572783_10
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(8511..8891)
DNA (381bp) protein (127aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
tRNA pseudouridine synthase D n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UTS5_9AQUI
Tax=CG_Woesearch_01
SR2-18-Sp2_coassembly_scaffold_572783_11
unknown

Not on your lists

9064..10038
DNA (975bp) protein (325aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_572783_12
unknown

Not on your lists

comp(10145..10648)
DNA (504bp) protein (168aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_572783_13
unknown

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11307..12023
DNA (717bp) protein (239aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_572783_14
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(12042..12437)
DNA (396bp) protein (132aa)
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
SR2-18-Sp2_coassembly_scaffold_572783_15

Not on your lists

12568..12756
DNA (189bp) protein (63aa)
ribosomal protein S17e Rps17e; K02962 small subunit ribosomal protein S17e id=5043656 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S17e
SR2-18-Sp2_coassembly_scaffold_572783_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12822..13061
DNA (240bp) protein (80aa)
Nucleoid protein Alba id=5800747 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA/RNA-binding protein Alba
Tax=RBG_13_Pacearchaeota_36_9_curated
SR2-18-Sp2_coassembly_scaffold_572783_17
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(13188..14132)
DNA (945bp) protein (315aa)
tRNA-dihydrouridine synthase 1 n=1 Tax=human gut metagenome RepID=K1TXM9_9ZZZZ
NifR3 family TIM-barrel protein
Tax=CG_Pacearch_05
Displaying 18 items

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