ggKbase home page

SR2-18-Sp2_coassembly_scaffold_181321

Search features with annotation key words

Displaying 10 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR2-18-Sp2_coassembly_scaffold_181321_1

Not on your lists

comp(125..388)
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51247.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5046354 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
PRC-barrel protein
SR2-18-Sp2_coassembly_scaffold_181321_2
unknown

Not on your lists

451..564
DNA (114bp) protein (38aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_181321_3

Not on your lists

593..1669
DNA (1077bp) protein (359aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Uncharacterized protein id=5800116 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SR2-18-Sp2_coassembly_scaffold_181321_4
unknown

Not on your lists

comp(1683..2369)
DNA (687bp) protein (229aa)

This feature has no annotations

SR2-18-Sp2_coassembly_scaffold_181321_5

Not on your lists

comp(2431..3441)
DNA (1011bp) protein (337aa)
processing peptidase (EC:3.4.24.64) id=5041801 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Marine sediment metagenome DNA, contig: S01H1_L00186 {ECO:0000313|EMBL:GAF79717.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
peptidase M16
SR2-18-Sp2_coassembly_scaffold_181321_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

3655..4428
DNA (774bp) protein (258aa)
Xaa-Pro dipeptidase (EC:3.4.13.9)
Xaa-Pro dipeptidase id=5800114 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR11
SR2-18-Sp2_coassembly_scaffold_181321_7
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

4486..5565
DNA (1080bp) protein (360aa)
Peptidase M29 aminopeptidase II id=1871240 bin=GWB2_Proteobacteria_55_19 species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
peptidase M29, aminopeptidase II
Tax=CG_Woesearch_03
SR2-18-Sp2_coassembly_scaffold_181321_8
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

5700..6725
DNA (1026bp) protein (342aa)
NEQ186 id=5800112 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
proteasome-activating nucleotidase
Tax=CG_Woesearch_03
SR2-18-Sp2_coassembly_scaffold_181321_9
Parcubacteria bacterium GW2011_GWC2_45_7, Parcubacteria, Bacteria

Not on your lists

6737..7234
DNA (498bp) protein (166aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU12790.1}; TaxID=1618932 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_45_7.;"
coiled-coil id=5094916 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
SR2-18-Sp2_coassembly_scaffold_181321_10
unknown

Not on your lists

comp(7241..7423)
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying 10 items

View Taxonomy