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SRVP18_trench_6_60cm_scaffold_12231

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SRVP18_trench_6_60cm_scaffold_12231_1
unknown

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256..609
DNA (354bp) protein (118aa)
methionine gamma-lyase (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RY77_THEOJ
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_12231_2
unknown

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629..1324
DNA (696bp) protein (232aa)
methionine gamma-lyase (EC:4.4.1.11)
Methionine gamma-lyase n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5E021_9FIRM
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_12231_3
unknown

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comp(1340..1597)
DNA (258bp) protein (86aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_12231_4
unknown

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2726..4045
DNA (1320bp) protein (440aa)
Menaquinone biosynthesis decarboxylase, SCO4490 family n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJL4_DESK7
menaquinone biosynthesis decarboxylase
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_12231_5
unknown

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comp(4073..4864)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=M1PQA8_9ZZZZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_12231_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4882..5757
DNA (876bp) protein (292aa)
UbiA prenyltransferase family protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FVU4_9FIRM
UbiA; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SRVP18_trench_6_60cm_scaffold_12231_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5848..6087
DNA (240bp) protein (80aa)
transcription regulator, SpoVT/AbrB family
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SRVP18_trench_6_60cm_scaffold_12231_8
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6157..6456
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PVZ3_9BACT
Q3M7V5 PilT like protein
Tax=GWC2_Geobacteraceae_55_20_curated
SRVP18_trench_6_60cm_scaffold_12231_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6604..6903
DNA (300bp) protein (100aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|HAMAP-Rule:MF_00757}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ribonuclease P protein component 4 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RNP4_METBU
RNAse P, Rpr2/Rpp21 subunit
SRVP18_trench_6_60cm_scaffold_12231_10
unknown

Not on your lists

6947..9004
DNA (2058bp) protein (686aa)
thioredoxin domain protein id=14426144 bin=bin1_lowGC species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
thioredoxin domain protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_12231_11
RIFOXYA12_FULL_WOR_1_43_27_curated, Saganbacteria, Bacteria

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comp(9085..9426)
DNA (342bp) protein (114aa)
hypothetical protein
UPF0331 protein TTE0752 id=3587985 bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
SRVP18_trench_6_60cm_scaffold_12231_12
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9423..9707)
DNA (285bp) protein (95aa)
Nucleotidyltransferase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WP16_METH6
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:AET64857.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
SRVP18_trench_6_60cm_scaffold_12231_13

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10003..10611
DNA (609bp) protein (203aa)
DNA helicase RecQ id=2379960 bin=GWD1_TM7_39_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
ATP-dependent DNA helicase RecQ
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
Displaying 13 items

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