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SRVP18_trench_6_60cm_scaffold_3102

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SRVP18_trench_6_60cm_scaffold_3102_1
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(1..1368)
DNA (1368bp) protein (456aa)
Putative restriction/modification enzyme n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FLV6_9EURY
Putative type II DNA modification enzyme
Putative type II DNA modification enzyme {ECO:0000313|EMBL:AET65040.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
SRVP18_trench_6_60cm_scaffold_3102_2
unknown

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comp(1476..2057)
DNA (582bp) protein (194aa)
Holliday junction DNA helicase RuvA n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LKI0_METBM
ruvA; holliday junction DNA helicase RuvA
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_3102_3
unknown

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2273..2641
DNA (369bp) protein (123aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_3102_4
unknown

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comp(2748..3218)
DNA (471bp) protein (157aa)
Holliday junction endonuclease RuvC n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YZN5_9EURY
ruvC; Holliday junction resolvase
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_3102_5
Methanosarcina lacustris, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3366..3689
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465W8_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB76345.1}; TaxID=1434111 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina lacustris Z-7289.;"
SRVP18_trench_6_60cm_scaffold_3102_6
RBG_16_OP11_Woesebacteria_34_12_curated, Woesebacteria, Microgenomates, Bacteria

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4059..4493
DNA (435bp) protein (145aa)
Flavodoxin n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AU0_METBF
flavodoxin
Tax=RBG_16_OP11_Woesebacteria_34_12_curated
SRVP18_trench_6_60cm_scaffold_3102_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4591..5094
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BYQ0_METCG
Putative regulator of amino acid metabolism, contains ACT domain {ECO:0000313|EMBL:KCZ72420.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SRVP18_trench_6_60cm_scaffold_3102_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5091..5939)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPZ6_METZD
Putative acyltransferase {ECO:0000313|EMBL:KCZ72419.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SRVP18_trench_6_60cm_scaffold_3102_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6054..6227
DNA (174bp) protein (58aa)
Putative RNA-binding protein {ECO:0000313|EMBL:KCZ72418.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SRVP18_trench_6_60cm_scaffold_3102_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6249..7262
DNA (1014bp) protein (338aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388}; Short=GAPDH {ECO:0000256|HAMAP-Rule:MF_00559};; EC=1.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00559, ECO:0000256|RuleBase:RU003388};; NAD(P)-dependent glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00559}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B3C2 related cluster n=1 Tax=unknown RepID=UPI0003D1B3C2
glyceraldehyde-3-phosphate dehydrogenase
SRVP18_trench_6_60cm_scaffold_3102_11
unknown

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7361..8065
DNA (705bp) protein (235aa)
Phosphoribosyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MNH5_9EURY
phosphoribosyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_3102_12
unknown

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8070..8921
DNA (852bp) protein (284aa)
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MC73_9EURY
methylthioadenosine phosphorylase
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_3102_13
unknown

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8952..9470
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKI2_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_3102_14
unknown

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9467..10075
DNA (609bp) protein (203aa)
3-hexulose-6-phosphate isomerase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467C4_METBF
6-phospho-3-hexuloisomerase
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_trench_6_60cm_scaffold_3102_15
unknown

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10080..11159
DNA (1080bp) protein (360aa)
Aminotransferase class I and II n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EB95_METEZ
class I/II aminotransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 15 items

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