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sw_10_scaffold_1004

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1004_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..819
DNA (819bp) protein (273aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
DNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0Y4_HALMD
DNA polymerase B exonuclease
sw_10_scaffold_1004_2
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

836..3259
DNA (2424bp) protein (808aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="H
DNA polymerase n=2 Tax=Halarchaeum acidiphilum RepID=U2YCN6_9EURY
DNA polymerase B region
sw_10_scaffold_1004_3
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3333..6305
DNA (2973bp) protein (991aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
polB1; DNA polymerase B1 (EC:2.7.7.7)
DNA polymerase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRZ0_9EURY
sw_10_scaffold_1004_4
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6442..7362
DNA (921bp) protein (307aa)
ABC transporter ATP-binding protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JGJ1_HALVA
yurF; ABC transporter ATP-binding protein
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA06810.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula valli
sw_10_scaffold_1004_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7406..8830
DNA (1425bp) protein (475aa)
SufB domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLJ2_NATM8
sufB4; SufB domain protein
SufB domain protein {ECO:0000313|EMBL:CCQ37816.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (stra
sw_10_scaffold_1004_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8856..9548
DNA (693bp) protein (231aa)
SufB domain-containing protein n=1 Tax=Halomicrobium katesii RepID=UPI000370A9DE
sufD; iron-sulfur cluster assembly protein SufD
Iron-sulfur cluster assembly protein SufD {ECO:0000313|EMBL:CCQ32698.1}; SufBD protein {ECO:0000313|EMBL:ERJ07645.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_10_scaffold_1004_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9689..10054
DNA (366bp) protein (122aa)
SufBD protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRC8_HALUD
SufBD protein
SufBD protein {ECO:0000313|EMBL:ACV10565.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM 129
sw_10_scaffold_1004_8
unknown

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10133..10735
DNA (603bp) protein (201aa)

This feature has no annotations

sw_10_scaffold_1004_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10869..11345
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P115_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV49030.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_1004_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11356..11787
DNA (432bp) protein (144aa)
Iron (Metal) dependent repressor, DtxR family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P116_HALMD
DtxR family iron (metal) dependent repressor
Iron (Metal) dependent repressor, DtxR family {ECO:0000313|EMBL:ACV49031.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Hal
sw_10_scaffold_1004_11
unknown

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11794..11934
DNA (141bp) protein (47aa)

This feature has no annotations

sw_10_scaffold_1004_12
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12000..12335
DNA (336bp) protein (112aa)
Putative peroxidase-related enzyme n=1 Tax=halophilic archaeon J07HX5 RepID=U1PCX8_9EURY
Putative peroxidase-related enzyme {ECO:0000313|EMBL:ERG89946.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
alkylhydroperoxidase
sw_10_scaffold_1004_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12332..12532
DNA (201bp) protein (67aa)
Alkylhydroperoxidase AhpD family core domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLJ4_9EURY
Alkylhydroperoxidase AhpD family core domain-containing protein {ECO:0000313|EMBL:ELZ24145.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimple
hypothetical protein
sw_10_scaffold_1004_14
unknown

Not on your lists

12712..12909
DNA (198bp) protein (66aa)

This feature has no annotations

sw_10_scaffold_1004_15
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12914..13396
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV93_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11177.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_10_scaffold_1004_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13502..14197
DNA (696bp) protein (232aa)
Transcription repressor n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLM2_9EURY
Transcription repressor {ECO:0000313|EMBL:ELZ24146.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
DtxR family transcriptional regulator
sw_10_scaffold_1004_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14194..15462
DNA (1269bp) protein (423aa)
Multicopper oxidase type 3 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0F9_HALTV
multicopper oxidase type 3
Multicopper oxidase type 3 {ECO:0000313|EMBL:ADB62856.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (st
sw_10_scaffold_1004_18
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15464..16726
DNA (1263bp) protein (421aa)
Putative metal cation transporter n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S0F8_HALTV
metal cation transporter
Putative metal cation transporter {ECO:0000313|EMBL:ADB62855.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmen
sw_10_scaffold_1004_19
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16780..17253
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KN70_HALAR
Uncharacterized protein {ECO:0000313|EMBL:ERG90276.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_10_scaffold_1004_20
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17478..17723
DNA (246bp) protein (82aa)
DUF457 family protein n=2 Tax=Haloquadratum walsbyi RepID=G0LG66_HALWC
DUF457 family protein
DUF457 family protein {ECO:0000313|EMBL:CAJ51216.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain D
sw_10_scaffold_1004_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17791..18381
DNA (591bp) protein (197aa)
transcription regulator id=24648920 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Transcriptional regulator {ECO:0000313|EMBL:ERH10053.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
transcription regulator
sw_10_scaffold_1004_22
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18447..20243)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Mycobacterium sp. 012931 RepID=S7QTL8_9MYCO
Putative uncharacterized protein Tax=GWD2_Deltaproteobacteria_55_8_curated
sw_10_scaffold_1004_23
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20599..20979
DNA (381bp) protein (127aa)
ATPase, P-type, transporting, HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q330_9EURY
ATPase, P-type, transporting, HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ERH00773.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Halofera
heavy metal translocating P-type ATPase
sw_10_scaffold_1004_24
unknown

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comp(20965..21546)
DNA (582bp) protein (194aa)

This feature has no annotations

sw_10_scaffold_1004_25
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21543..22082)
DNA (540bp) protein (180aa)
camH3; creatinine amidohydrolase (EC:3.5.2.10)
Amidase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SS61_9EURY
Creatinine amidohydrolase {ECO:0000313|EMBL:EMA29793.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6
sw_10_scaffold_1004_26
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22112..22228)
DNA (117bp) protein (39aa)
camH3; creatinine amidohydrolase (EC:3.5.2.10)
Creatinine amidohydrolase {ECO:0000313|EMBL:AEM56588.1}; EC=3.5.2.10 {ECO:0000313|EMBL:AEM56588.1};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
Creatinine amidohydrolase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L9M5_HALJP
sw_10_scaffold_1004_27
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22344..24827
DNA (2484bp) protein (828aa)
Branched-chain amino acid ABC transporter permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D3M1_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ28759.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
branched-chain amino acid ABC transporter permease
Displaying 27 items

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