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sw_10_scaffold_1013

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1013_1
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..297)
DNA (297bp) protein (99aa)
Phosphate binding protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FHB0_9EURY
phosphate ABC transporter substrate-binding protein
Phosphate binding protein {ECO:0000313|EMBL:ELZ59426.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 7
sw_10_scaffold_1013_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

613..1575
DNA (963bp) protein (321aa)
Phosphate regulatory protein-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KFN6_HALAR
Phosphate regulatory protein-like protein {ECO:0000313|EMBL:EMA19678.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
prp1; phosphate regulatory protein-like
sw_10_scaffold_1013_3
unknown

Not on your lists

1685..1900
DNA (216bp) protein (72aa)

This feature has no annotations

sw_10_scaffold_1013_4
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1878..2249)
DNA (372bp) protein (124aa)
30S ribosomal protein S8e n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUT7_HALUD
30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;
sw_10_scaffold_1013_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2337..2777
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P490_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47912.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_1013_6
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2777..3145
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX5 RepID=U1PCU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG89911.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_10_scaffold_1013_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3146..3580)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXW9_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46557.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_1013_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3870..4526)
DNA (657bp) protein (219aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M828_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EMA41503.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_10_scaffold_1013_9
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4615..5721
DNA (1107bp) protein (369aa)
NMD3 family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ48_9EURY
nonsense mediated mRNA decay-like protein
NMD3 family protein {ECO:0000313|EMBL:ERJ06848.1}; Nonsense mediated mRNA decay-like protein {ECO:0000313|EMBL:CCQ33013.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_10_scaffold_1013_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5718..6734
DNA (1017bp) protein (339aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
Putative methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D246_9EURY
tRNA methylase Trm12p Wyeosine biosynthesis
sw_10_scaffold_1013_11
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6801..7487
DNA (687bp) protein (229aa)
Short-chain alcohol dehydrogenase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I7P3_HALRX
short-chain alcohol dehydrogenase
Short-chain alcohol dehydrogenase {ECO:0000313|EMBL:AGB14714.1}; Flags: Precursor;; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovi
sw_10_scaffold_1013_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7466..8572
DNA (1107bp) protein (369aa)
deoxyribodipyrimidine photolyase-related protein; K06876 deoxyribodipyrimidine photolyase-related protein id=24645788 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Deoxyribodipyrimidine photo-lyase-related protein {ECO:0000313|EMBL:ERH10007.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
deoxyribodipyrimidine photolyase-related protein
sw_10_scaffold_1013_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8601..9098)
DNA (498bp) protein (166aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LGK1_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA31115.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ
phr_2; deoxyribodipyrimidine photolyase
sw_10_scaffold_1013_14
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9076..9939)
DNA (864bp) protein (288aa)
Deoxyribodipyrimidine photolyase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LGK1_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:EMA31115.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ
phr_2; deoxyribodipyrimidine photolyase
sw_10_scaffold_1013_15
unknown

Not on your lists

9998..10138
DNA (141bp) protein (47aa)

This feature has no annotations

sw_10_scaffold_1013_16
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10135..10338)
DNA (204bp) protein (68aa)
hypothetical protein id=24641311 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Uncharacterized protein {ECO:0000313|EMBL:ERH11392.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_10_scaffold_1013_17
unknown

Not on your lists

10451..10660
DNA (210bp) protein (70aa)

This feature has no annotations

sw_10_scaffold_1013_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10669..11556
DNA (888bp) protein (296aa)
NmrA family protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZ03_9EURY
NmrA family protein {ECO:0000313|EMBL:ELZ27657.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
NmrA family protein
sw_10_scaffold_1013_19
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11557..12543
DNA (987bp) protein (329aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UYL3_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA14380.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_10_scaffold_1013_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12465..13553)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZ13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58268.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_10_scaffold_1013_21
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14504..15529
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QQ47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH09248.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_1013_22
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15514..16143)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9S3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16412.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_10_scaffold_1013_23
unknown

Not on your lists

comp(16248..16340)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_10_scaffold_1013_24
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16435..17019
DNA (585bp) protein (195aa)
LemA-like protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Q2_9EURY
lemA-like protein rbh
LemA-like protein {ECO:0000313|EMBL:AGN00824.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_10_scaffold_1013_25
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17016..17915
DNA (900bp) protein (300aa)
LemA domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VUE1_9EURY
LemA domain-containing protein
LemA domain-containing protein {ECO:0000313|EMBL:AGN00825.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harch
sw_10_scaffold_1013_26
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17960..18730
DNA (771bp) protein (257aa)
Uncharacterized protein id=24647286 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09833.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_10_scaffold_1013_27
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18765..20081)
DNA (1317bp) protein (439aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K057_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB38682.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_10_scaffold_1013_28
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20078..20320)
DNA (243bp) protein (81aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Natronococcus occultus SP4 RepID=L0K3J5_9EURY
4-hydroxythreonine-4-phosphate dehydrogenase
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000313|EMBL:AGB38683.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococ
sw_10_scaffold_1013_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20290..21117)
DNA (828bp) protein (276aa)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA34_HALJB
4-hydroxythreonine-4-phosphate dehydrogenase
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000313|EMBL:ADJ14556.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Ha
sw_10_scaffold_1013_30
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21114..22424)
DNA (1311bp) protein (437aa)
YgbK domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA33_HALJB
ygbK domain-containing protein rbh
YgbK domain protein {ECO:0000313|EMBL:ADJ14555.1}; YgbK domain-containing protein {ECO:0000313|EMBL:ELY39927.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
Displaying items 1-30 of 40 in total

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