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sw_10_scaffold_1234

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1234_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..878)
DNA (876bp) protein (292aa)
ABC transporter related n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY91_HALMD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACV48551.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_1234_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1222..2058
DNA (837bp) protein (279aa)
ABC-transport system ATP binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D096_9EURY
ABC-transport system ATP binding protein {ECO:0000313|EMBL:ELZ27544.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
hypothetical protein
sw_10_scaffold_1234_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2251..3435
DNA (1185bp) protein (395aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWI2_9EURY
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:ELZ27545.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;"
ribose ABC transporter, ribose-binding protein
sw_10_scaffold_1234_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3462..4499
DNA (1038bp) protein (346aa)
Sugar ABC transporter integral membrane subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWF3_9EURY
Sugar ABC transporter integral membrane subunit {ECO:0000313|EMBL:ELZ27546.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
hypothetical protein
sw_10_scaffold_1234_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4647..4967)
DNA (321bp) protein (107aa)
DNA-directed RNA polymerase subunit {ECO:0000256|PIRNR:PIRNR005586}; EC=2.7.7.6 {ECO:0000256|PIRNR:PIRNR005586};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
rpoM; DNA-directed RNA-polymerase subunit M (EC:2.7.7.6)
DNA-directed RNA polymerase subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5B6_9EURY
sw_10_scaffold_1234_6
unknown

Not on your lists

5633..5752
DNA (120bp) protein (40aa)

This feature has no annotations

sw_10_scaffold_1234_7
unknown

Not on your lists

6153..6290
DNA (138bp) protein (46aa)

This feature has no annotations

sw_10_scaffold_1234_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6395..6889
DNA (495bp) protein (165aa)
Resolvase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVL8_9EURY
Resolvase {ECO:0000313|EMBL:EMA48844.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
site-specific recombinase, DNA invertase Pin
sw_10_scaffold_1234_9
unknown

Not on your lists

6913..7056
DNA (144bp) protein (48aa)

This feature has no annotations

sw_10_scaffold_1234_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7342..7722
DNA (381bp) protein (127aa)
Regulatory protein ArsR n=1 Tax=Halobacterium sp. DL1 RepID=G4IGG0_9EURY
Regulatory protein ArsR {ECO:0000313|EMBL:AHG03410.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
ArsR family transcriptional regulator
sw_10_scaffold_1234_11
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7715..8548
DNA (834bp) protein (278aa)
Methyltransferase type 11 n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LNA0_HALLT
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACM56838.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (stra
sw_10_scaffold_1234_12
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8650..8940
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IGG2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05223.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_10_scaffold_1234_13
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9025..9474
DNA (450bp) protein (150aa)
N-acetyltransferase GCN5 n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VHF9_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELY36491.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.
N-acetyltransferase GCN5
sw_10_scaffold_1234_14
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9908..10168)
DNA (261bp) protein (87aa)
Zn-dependent oxidoreductase, NADPH:quinone reductase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NW67_HALBP
Zn-dependent oxidoreductase, NADPH:quinone reductase
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:ADQ69287.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source
sw_10_scaffold_1234_15
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10248..10433
DNA (186bp) protein (62aa)
Predicted transcriptional regulator n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NW66_HALBP
transcriptional regulator
Predicted transcriptional regulator {ECO:0000313|EMBL:ADQ69286.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
sw_10_scaffold_1234_16
unknown

Not on your lists

comp(10352..10564)
DNA (213bp) protein (71aa)

This feature has no annotations

sw_10_scaffold_1234_17
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10622..11029)
DNA (408bp) protein (136aa)
transcription regulator id=24617322 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Putative transcriptional regulator {ECO:0000313|EMBL:ERH08143.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN
transcriptional regulator, HxlR family
sw_10_scaffold_1234_18
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11035..11613)
DNA (579bp) protein (193aa)
Putative flavoprotein n=1 Tax=Natronococcus occultus SP4 RepID=L0K1E5_9EURY
putative flavoprotein
Putative flavoprotein {ECO:0000313|EMBL:AGB37943.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_10_scaffold_1234_19
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11696..12634)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JN35_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09379.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_10_scaffold_1234_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12680..13354)
DNA (675bp) protein (225aa)
Multidrug ABC transporter n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZC5_9EURY
Multidrug ABC transporter {ECO:0000313|EMBL:EMA51067.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
multidrug ABC transporter
Displaying 20 items

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