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sw_10_scaffold_1505

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1505_1
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..960
DNA (960bp) protein (320aa)
Transposase, IS605 OrfB family n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SV75_NATMM
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ADD05483.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain AT
sw_10_scaffold_1505_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(1193..1786)
DNA (594bp) protein (198aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SH23_GEOOG
EmrB/QacA subfamily drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ADB75016.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geo
sw_10_scaffold_1505_3
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1819..2691)
DNA (873bp) protein (291aa)
Signal sequence peptidase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4G5_HALJB
signal sequence peptidase
Signal sequence peptidase {ECO:0000313|EMBL:ADJ13527.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotg
sw_10_scaffold_1505_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2735..4369
DNA (1635bp) protein (545aa)
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase II small subunit {ECO:0000256|HAMAP-Rule:MF_00325}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00325};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00325};; TaxID=485914 species="Archaea; Euryar
DNA-directed DNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P040_HALMD
sw_10_scaffold_1505_5
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4366..5160
DNA (795bp) protein (265aa)
Thiamine pyrophosphate enzyme n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DEM1_9EURY
Thiamine pyrophosphate enzyme {ECO:0000313|EMBL:ELZ33177.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense
pyruvate oxidase
sw_10_scaffold_1505_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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5239..5766
DNA (528bp) protein (176aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
peptide methionine sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LDE2_9EURY
sw_10_scaffold_1505_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6081..7163)
DNA (1083bp) protein (361aa)
Geranylgeranyl hydrogenase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LNB6_HALJP
Geranylgeranyl hydrogenase {ECO:0000313|EMBL:EMA33510.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM
bchP; geranylgeranyl hydrogenase
sw_10_scaffold_1505_8
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7203..8171)
DNA (969bp) protein (323aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase {ECO:0000313|EMBL:CCQ34564.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CCQ34564.1};; Glucose-1-phosphate thymidylyltransferase protein {ECO:0000313|EMBL:ERJ06395.1}; EC
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PLZ5_9EURY
sw_10_scaffold_1505_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8250..8540
DNA (291bp) protein (97aa)
hypothetical protein; K07743 hypothetical protein id=24646239 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:ERH10418.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="
hypothetical protein
sw_10_scaffold_1505_10
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8653..9333)
DNA (681bp) protein (227aa)
Transcriptional regulator n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W889_9EURY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGN00429.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk
sw_10_scaffold_1505_11
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9441..10382
DNA (942bp) protein (314aa)
Phenylacetate-CoA oxygenase subunit PaaA n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CGG2_9EURY
Phenylacetate-CoA oxygenase subunit PaaA {ECO:0000313|EMBL:ELZ21447.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena
phenylacetic acid catabolic family protein
sw_10_scaffold_1505_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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10387..10545
DNA (159bp) protein (53aa)
Putative enzyme of phenylacetate metabolism n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VVZ0_9EURY
putative enzyme of phenylacetate metabolism
Putative enzyme of phenylacetate metabolism {ECO:0000313|EMBL:AGN00431.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarcha
Displaying 12 items

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