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sw_10_scaffold_1940

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1940_1
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..359)
DNA (357bp) protein (119aa)
Catalytic domain of bacteriophage endosialidase n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q6S8_9EURY
Catalytic domain of bacteriophage endosialidase {ECO:0000313|EMBL:ERH00722.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonot
hypothetical protein
sw_10_scaffold_1940_2
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(751..1923)
DNA (1173bp) protein (391aa)
Filamentation induced by cAMP protein Fic n=2 Tax=Haloarcula hispanica RepID=G0HYL7_HALHT
cell filamentation protein Fic
Cell filamentation protein Fic {ECO:0000313|EMBL:AJF24397.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA11
sw_10_scaffold_1940_3
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1976..2770)
DNA (795bp) protein (265aa)
IS1341-type transposase (TCE32) n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZN36_9EURY
IS1341-type transposase (TCE32) {ECO:0000313|EMBL:ELY86548.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis J
transposase, IS605 OrfB family, central region
sw_10_scaffold_1940_4
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3022..3339)
DNA (318bp) protein (106aa)
IS1341-type transposase (TCE32) n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=L9ZN73_9EURY
IS1341-type transposase (TCE32) {ECO:0000313|EMBL:ELY86603.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis J
hypothetical protein
sw_10_scaffold_1940_5
unknown

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comp(3287..3472)
DNA (186bp) protein (62aa)

This feature has no annotations

sw_10_scaffold_1940_6
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3474..3851)
DNA (378bp) protein (126aa)
Catalytic domain of bacteriophage endosialidase n=1 Tax=Halonotius sp. J07HN6 RepID=U1Q6S8_9EURY
Catalytic domain of bacteriophage endosialidase {ECO:0000313|EMBL:ERH00722.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonot
hypothetical protein
sw_10_scaffold_1940_7
unknown

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comp(3848..4078)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_10_scaffold_1940_8
unknown

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4205..4564
DNA (360bp) protein (120aa)

This feature has no annotations

sw_10_scaffold_1940_9
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4504..5904)
DNA (1401bp) protein (467aa)
PAS/PAC sensor signal transduction histidine kinase id=24656019 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
PAS/PAC domain protein {ECO:0000313|EMBL:ERG89370.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
PAS domain S-box
sw_10_scaffold_1940_10
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5901..7865)
DNA (1965bp) protein (655aa)
signal-transducing histidine kinase/response regulator id=24625509 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
PAS sensor histidine kinase {ECO:0000313|EMBL:ERG97675.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX
light and redox sensing histidine kinase
sw_10_scaffold_1940_11
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8178..9644
DNA (1467bp) protein (489aa)
Response regulator receiver protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NQG7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE57273.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_10_scaffold_1940_12
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9738..9965
DNA (228bp) protein (76aa)
Transposase IS4 family protein n=3 Tax=Archaea RepID=B9LV91_HALLT
transposase IS4 family protein
Transposase IS4 family protein {ECO:0000313|EMBL:ACM58604.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi
sw_10_scaffold_1940_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10081..10206
DNA (126bp) protein (42aa)
Transposase IS4 family protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PUW9_9EURY
transposase IS4 family protein
Transposase IS4 {ECO:0000313|EMBL:AHG05459.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_10_scaffold_1940_14
unknown

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comp(10203..10382)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_10_scaffold_1940_15
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10486..11868)
DNA (1383bp) protein (461aa)
gcvT1; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Probable aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=1417673 sp
Glycine cleavage system protein T n=2 Tax=Haloarcula hispanica RepID=V5TMU3_HALHI
sw_10_scaffold_1940_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11996..13387)
DNA (1392bp) protein (464aa)
Glucose sorbosone dehydrogenase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXK7_HALMD
glucose sorbosone dehydrogenase
Glucose sorbosone dehydrogenase {ECO:0000313|EMBL:ACV48441.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_10_scaffold_1940_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13588..14499
DNA (912bp) protein (304aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=485914 spec
5'-nucleotidase SurE n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY07_HALMD
stationary-phase survival protein SurE
sw_10_scaffold_1940_18
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14549..14653)
DNA (105bp) protein (35aa)
pheA1; chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E571_9EURY
Chorismate mutase {ECO:0000313|EMBL:ELZ42936.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
Displaying 18 items

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