ggKbase home page

sw_10_scaffold_2079

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_2079_1
unknown

Not on your lists

3..77
DNA (75bp) protein (25aa)

This feature has no annotations

sw_10_scaffold_2079_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

281..1024
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase n=1 Tax=Halogranum salarium B-1 RepID=J3JEW9_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EJN58731.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
3-ketoacyl-ACP reductase
sw_10_scaffold_2079_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1018..2187
DNA (1170bp) protein (390aa)
acaB2; acetyl-CoA C-acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:CCQ37444.1}; EC=2.3.1.9 {ECO:0000313|EMBL:CCQ37444.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Acetyl-CoA C-acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLC0_NATM8
sw_10_scaffold_2079_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2184..2576
DNA (393bp) protein (131aa)
DUF35 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSS5_NATM8
DUF35 family protein
DUF35 family protein {ECO:0000313|EMBL:CCQ37443.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (str
sw_10_scaffold_2079_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2645..3112)
DNA (468bp) protein (156aa)
Uncharacterized protein id=24644395 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH08620.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_10_scaffold_2079_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3486..4748)
DNA (1263bp) protein (421aa)
ereB; erythromycin esterase-like protein id=24647353 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Erythromycin esterase related protein {ECO:0000313|EMBL:ERH08499.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ereB; erythromycin esterase-like protein
sw_10_scaffold_2079_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5152..6450
DNA (1299bp) protein (433aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1085028 species="Archaea; Euryarchaeota; Halo
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=halophilic archaeon J07HX64 RepID=U1QR25_9EURY
sw_10_scaffold_2079_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6509..7177
DNA (669bp) protein (223aa)
Transcriptional regulator, TrmB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXB9_HALMD
TrmB family transcriptional regulator
Transcriptional regulator, TrmB {ECO:0000313|EMBL:ACV48353.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_10_scaffold_2079_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7226..7738
DNA (513bp) protein (171aa)
Cytidyltransferase-related domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRF3_HALUD
phosphopantetheine adenylyltransferase
Cytidyltransferase-related domain protein {ECO:0000313|EMBL:ACV10590.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabd
sw_10_scaffold_2079_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7739..8074)
DNA (336bp) protein (112aa)
transcription factor TFIIB id=24648941 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB {ECO:0000313|EMBL:ERH10074.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;
tfbA_4; transcription initiation factor TFB 4
sw_10_scaffold_2079_trna_1
unknown

Not on your lists

8129..8213
DNA (85bp)
transferRNA
sw_10_scaffold_2079_11
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8243..8680
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HV41_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ88480.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
sw_10_scaffold_2079_12
unknown

Not on your lists

8844..9611
DNA (768bp) protein (256aa)

This feature has no annotations

sw_10_scaffold_2079_13
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9730..10131)
DNA (402bp) protein (134aa)
Uncharacterized protein domain protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DRV2_9EURY
Uncharacterized protein domain protein {ECO:0000313|EMBL:CDK38919.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. A
sw_10_scaffold_2079_14
unknown

Not on your lists

10175..10411
DNA (237bp) protein (79aa)

This feature has no annotations

sw_10_scaffold_2079_15
unknown

Not on your lists

10448..10573
DNA (126bp) protein (42aa)

This feature has no annotations

sw_10_scaffold_2079_16
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10623..10922)
DNA (300bp) protein (100aa)
Uncharacterized protein id=24625532 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERG97692.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
sw_10_scaffold_2079_17
unknown

Not on your lists

10938..11069
DNA (132bp) protein (44aa)

This feature has no annotations

sw_10_scaffold_2079_18
unknown

Not on your lists

11504..11644
DNA (141bp) protein (47aa)

This feature has no annotations

sw_10_scaffold_2079_19
unknown

Not on your lists

comp(11835..11972)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_10_scaffold_2079_trna_2
unknown

Not on your lists

12231..12315
DNA (85bp)
transferRNA
sw_10_scaffold_2079_20
Halovirus HRTV-5, Viruses

Not on your lists

12468..12791
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halovirus HRTV-5 RepID=R4T860_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AGM11040.1}; TaxID=1273753 species="Viruses; dsDNA viruses, no RNA stage; unclassified dsDNA viruses; unclassified archaeal dsDNA viruses; Haloviruses.;" sour
sw_10_scaffold_2079_21
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12800..13012)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:ADD03833.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
hypothetical protein
Displaying 23 items

View Taxonomy