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sw_10_scaffold_2533

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_2533_1
unknown

Not on your lists

3..332
DNA (330bp) protein (110aa)

This feature has no annotations

sw_10_scaffold_2533_2
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

782..1588
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H0L0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78010.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_10_scaffold_2533_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1585..3000)
DNA (1416bp) protein (472aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KUJ7_HALAR
amidophosphoribosyltransferase
sw_10_scaffold_2533_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3002..3175)
DNA (174bp) protein (58aa)
50S ribosomal protein L37e n=1 Tax=Halogranum salarium B-1 RepID=J3A0Y9_9EURY
50S ribosomal protein L37e {ECO:0000256|HAMAP-Rule:MF_00547, ECO:0000256|SAAS:SAAS00257304}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halog
rpl37e; 50S ribosomal protein L37e
sw_10_scaffold_2533_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3172..3372)
DNA (201bp) protein (67aa)
Like-Sm ribonucleoprotein core n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWK0_HALMD
Sm ribonucleoprotein-like protein
Like-Sm ribonucleoprotein core {ECO:0000313|EMBL:ACV48210.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
sw_10_scaffold_2533_6
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3433..3663)
DNA (231bp) protein (77aa)
phosphoribosylformylglycinamidine synthase, subunit II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000256|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PHB0_9EURY
sw_10_scaffold_2533_7
unknown

Not on your lists

4154..4666
DNA (513bp) protein (171aa)

This feature has no annotations

sw_10_scaffold_2533_8
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

4901..5191
DNA (291bp) protein (97aa)
hypothetical protein Tax=RBG_13_Aminicenantes_63_10_curated
hypothetical protein id=24409437 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Rothia mucilaginosa genus=Rothia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
sw_10_scaffold_2533_9
unknown

Not on your lists

5509..5649
DNA (141bp) protein (47aa)

This feature has no annotations

sw_10_scaffold_2533_10
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5646..5933
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V2D8_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46314.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_10_scaffold_2533_11
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5954..6355)
DNA (402bp) protein (134aa)
Nucleic acid-binding protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LVR9_HALLT
nucleic acid-binding protein
Nucleic acid-binding protein {ECO:0000313|EMBL:ACM58782.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (s
sw_10_scaffold_2533_12
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6407..6718)
DNA (312bp) protein (104aa)
AbrB family transcriptional regulator n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T0J9_NATMM
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:ELY31634.1}; Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ADD06478.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; N
sw_10_scaffold_2533_13
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6823..8553
DNA (1731bp) protein (577aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00016154}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022, ECO:0000256|SAAS:SAAS00088701};; Glutamyl-tRNA synthetase {ECO:00
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8J1_HALJP
sw_10_scaffold_2533_14

Not on your lists

comp(8580..9191)
DNA (612bp) protein (204aa)
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUW3_9ARCH
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase {ECO:0000313|EMBL:ESS03951.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
pas domain s-box
sw_10_scaffold_2533_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9216..9920)
DNA (705bp) protein (235aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1
pdxS; pyridoxine biosynthesis lyase PdxS (EC:2.4.2.-)
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGT8_9EURY
sw_10_scaffold_2533_16
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10190..10888
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFE3_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA06724.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_10_scaffold_2533_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10920..11708
DNA (789bp) protein (263aa)
fadA3; enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CCQ37782.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CCQ37782.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
Enoyl-CoA hydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTI3_NATM8
sw_10_scaffold_2533_18
unknown

Not on your lists

11752..12018
DNA (267bp) protein (89aa)

This feature has no annotations

sw_10_scaffold_2533_19
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12019..12606)
DNA (588bp) protein (196aa)
DSBA oxidoreductase n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FHI3_9EURY
DSBA oxidoreductase {ECO:0000313|EMBL:ELZ58034.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.
DSBA oxidoreductase
sw_10_scaffold_2533_20
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12829..13197
DNA (369bp) protein (123aa)
probable beta-carotene 15,15'-monooxygenase (EC:1.14.99.36)
Beta-carotene 15,15'-monooxygenase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WII8_9EURY
Beta-carotene 15,15'-monooxygenase {ECO:0000313|EMBL:ELY49269.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bange
sw_10_scaffold_2533_21
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13199..13318)
DNA (120bp) protein (40aa)
phosphoglucosamine mutase (EC:5.4.2.10); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
Phosphomannomutase n=1 Tax=halophilic archaeon J07HX5 RepID=U1PBV8_9EURY
Phosphomannomutase {ECO:0000313|EMBL:ERG89566.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
Displaying 21 items

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