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sw_10_scaffold_308

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_308_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..400)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJX3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33917.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
chromosome segregation protein
sw_10_scaffold_308_2
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1497..2261)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FWU6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ63727.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
sugar epimerase/dehydratase homolog
sw_10_scaffold_308_3
Vibrio scophthalmi, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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2375..3304
DNA (930bp) protein (310aa)
putative Dihydrodipicolinate synthetase (EC:4.3.3.7)
Dihydrodipicolinate synthetase n=1 Tax=Vibrio scophthalmi LMG 19158 RepID=F9RV63_9VIBR
Dihydrodipicolinate synthetase {ECO:0000313|EMBL:EGU29787.1}; TaxID=870967 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio scophthalmi LMG 1
sw_10_scaffold_308_4
RLO_PLX_64_10, Bacteria

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comp(3582..4748)
DNA (1167bp) protein (389aa)
mandelate racemase n=1 Tax=Agromyces subbeticus RepID=UPI0003B371F4
Mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Mandelate racemasemuconate lactonizing protein
sw_10_scaffold_308_5
RLO_PLX_64_10, Bacteria

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4846..5991
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Enterobacter cloacae S611 RepID=V5AZP0_ENTCL
Mandelate racemase/muconate lactonizing protein Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
Mandelate racemasemuconate lactonizing protein
sw_10_scaffold_308_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6108..7220
DNA (1113bp) protein (371aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NVI1_HALBP
sugar ABC transporter ATP-binding protein
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ADQ68865.1}; Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY28707.1}; TaxID=469382 species="Archaea; Eur
sw_10_scaffold_308_7
Truepera radiovictrix, Truepera, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

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7316..8674
DNA (1359bp) protein (453aa)
Extracellular solute-binding protein family 1 n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CQ63_TRURR
family 1 extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ADI14847.1}; Flags: Precursor;; TaxID=649638 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Trueperaceae; Truepera.;
sw_10_scaffold_308_8
Bifidobacterium scardovii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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8762..9664
DNA (903bp) protein (301aa)
Putative L-arabinose transport system permease protein AraP {ECO:0000313|EMBL:KFI93242.1}; TaxID=158787 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sou
ABC transporter integral membrane protein; K02025 multiple sugar transport system permease protein id=24613697 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
binding-protein-dependent transport system inner membrane protein
sw_10_scaffold_308_9
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9664..10566
DNA (903bp) protein (301aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XX97_BACIE
binding-protein-dependent transporter inner membrane component
ABC transporter permease {ECO:0000313|EMBL:KHK95527.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
sw_10_scaffold_308_10
unknown

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10767..11093
DNA (327bp) protein (109aa)

This feature has no annotations

sw_10_scaffold_308_11
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11233..12027
DNA (795bp) protein (265aa)
Transcription regulator n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JFL1_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA06465.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
arcR5; ArcR family transcription regulator
sw_10_scaffold_308_12
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12204..13082
DNA (879bp) protein (293aa)
SMP-30/Gluconolaconase/LRE-like region-containing protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DCE5_HALXS
SMP-30/gluconolaconase/LRE-like region-containing protein
SMP-30/Gluconolaconase/LRE-like region-containing protein {ECO:0000313|EMBL:AEH38405.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="H
sw_10_scaffold_308_13

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comp(13487..13693)
DNA (207bp) protein (69aa)
Transposase n=1 Tax=halophilic archaeon DL31 RepID=G2MJY4_9ARCH
transposase
Transposase {ECO:0000313|EMBL:AEN05337.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_10_scaffold_308_14
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13757..15268)
DNA (1512bp) protein (504aa)
Subtilisin protein {ECO:0000313|EMBL:ERJ05505.1}; EC=3.1.3.1 {ECO:0000313|EMBL:ERJ05505.1};; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus
FG-GAP repeat-containing protein, possibly sugar-related n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PM90_9EURY
FG-GAP repeat-containing protein, possibly sugar-related
sw_10_scaffold_308_15
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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15577..16434
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XUW0_9EURY
Polysaccharide deacetylase {ECO:0000313|EMBL:KDE58563.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_10_scaffold_308_16
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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16490..17338
DNA (849bp) protein (283aa)
ABC-type transport system permease protein (Probable substrate spermidine/putrescine) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQX5_HALVD
potC; spermidine/putrescine ABC transporter permease
ABC-type transport system permease protein (Probable substrate spermidine/putrescine) {ECO:0000313|EMBL:ADE01801.1}; Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ELY31418.1}; TaxID
sw_10_scaffold_308_17
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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17335..18486
DNA (1152bp) protein (384aa)
Spermidine/putrescine ABC transporter ATP-binding protein n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=L9V4W8_HALVD
potA1; spermidine/putrescine ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein (Probable substrate spermidine/putrescine) {ECO:0000313|EMBL:ADE02025.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
sw_10_scaffold_308_18
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18488..19654
DNA (1167bp) protein (389aa)
Spermidine/putrescine ABC transporter substrate-binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XUV5_9EURY
Spermidine/putrescine ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELY65515.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" so
potA2; spermidine/putrescine ABC transporter substrate-binding protein
sw_10_scaffold_308_19
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19669..20571)
DNA (903bp) protein (301aa)
ABC-type transport system permease protein (Probable substrate spermidine/putrescine) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQX8_HALVD
potB; spermidine/putrescine ABC transporter permease
ABC-type transport system permease protein (Probable substrate spermidine/putrescine) {ECO:0000313|EMBL:ADE02187.1}; Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ELY31421.1}; TaxID
sw_10_scaffold_308_20
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20572..21996)
DNA (1425bp) protein (475aa)
ABC-type transport system periplasmic substrate-binding protein (Probable substrate spermidine/putrescine) n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GQX7_HALVD
potD; spermidine/putrescine ABC transporter substrate-binding protein
ABC-type transport system periplasmic substrate-binding protein (Probable substrate spermidine/putrescine) {ECO:0000313|EMBL:ADE01712.1}; Spermidine/putrescine ABC transporter substrate-binding protei
sw_10_scaffold_308_21
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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22158..23897
DNA (1740bp) protein (580aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9VXI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY40953.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
groL; hypothetical protein
sw_10_scaffold_308_22
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23904..25610)
DNA (1707bp) protein (569aa)
DNA cross-link repair 1C protein {ECO:0000313|EMBL:ERJ06485.1}; EC=3.1.-.- {ECO:0000313|EMBL:ERJ06485.1};; Metallo-beta-lactamase superfamily domain protein {ECO:0000313|EMBL:CCQ35126.1}; TaxID=103380
DNA cross-link repair 1C protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJM3_9EURY
metallo-beta-lactamase superfamily domain protein
sw_10_scaffold_308_23
unknown

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comp(25750..26148)
DNA (399bp) protein (133aa)

This feature has no annotations

Displaying 23 items

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