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sw_10_scaffold_3238

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_3238_1
unknown

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3..242
DNA (240bp) protein (80aa)

This feature has no annotations

sw_10_scaffold_3238_2
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(296..2335)
DNA (2040bp) protein (680aa)
Peptide ABC transporter ATP-binding protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PBW3_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:KKF39695.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
dppDF7; peptide ABC transporter ATP-binding protein
sw_10_scaffold_3238_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2337..3167)
DNA (831bp) protein (277aa)
ABC-type transport system permease protein (Probable substrate dipeptides/oligopeptides) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ24_9EURY
ABC-type transport system permease protein (Probable substrate dipeptides/oligopeptides) {ECO:0000313|EMBL:EFW90185.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
glutathione ABC transporter permease GsiD
sw_10_scaffold_3238_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3294..3908)
DNA (615bp) protein (205aa)
binding-protein-dependent transport system inner membrane protein; K02033 peptide/nickel transport system permease protein Tax=GWA2_Rokubacteria_70_23_curated
Binding-protein-dependent transport systems inner membrane component id=4117726 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter inner membrane protein
sw_10_scaffold_3238_5
Bacillus marmarensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4280..4741)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Amphibacillus jilinensis RepID=UPI0002FB0455
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ERN53494.1}; TaxID=1188261 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus marmarensis DSM 212
family 5 extracellular solute-binding protein
sw_10_scaffold_3238_6
Bacillus subterraneus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4885..5775)
DNA (891bp) protein (297aa)
Putative dipeptides/oligopeptides ABC transporter periplasmic substrate-binding protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G263_9EURY
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIY21813.1}; TaxID=285983 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus subterraneus
dppA4; putative dipeptides/oligopeptides ABC transporter periplasmic substrate-binding protein
sw_10_scaffold_3238_7
unknown

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6762..6908
DNA (147bp) protein (49aa)

This feature has no annotations

sw_10_scaffold_3238_8
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7035..8762
DNA (1728bp) protein (576aa)
uvrD; repair helicase (EC:3.6.4.12)
ATP-dependent DNA helicase pcrA n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YWH7_9EURY
ATP-dependent DNA helicase pcrA {ECO:0000313|EMBL:GAD53380.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-
sw_10_scaffold_3238_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8712..8933)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNA2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35391.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_10_scaffold_3238_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8937..9179)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNC3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35390.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_10_scaffold_3238_11
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9341..10045
DNA (705bp) protein (235aa)
Riboflavin synthase subunit alpha {ECO:0000313|EMBL:ELY92852.1}; EC=2.5.1.9 {ECO:0000313|EMBL:ELY92852.1};; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Na
ribE; riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase subunit alpha n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A4L5_9EURY
sw_10_scaffold_3238_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10068..11108)
DNA (1041bp) protein (347aa)
PrsW family protein n=2 Tax=Natronomonas pharaonis RepID=Q3ITR5_NATPD
hypothetical protein
PrsW family protein {ECO:0000313|EMBL:CAI48468.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_10_scaffold_3238_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11513..13270
DNA (1758bp) protein (586aa)
RNA-binding protein AU-1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMY8_NATM8
aubA; RNA-binding protein AU-1
RNA-binding protein AU-1 {ECO:0000256|HAMAP-Rule:MF_01910}; AU-binding protein {ECO:0000256|HAMAP-Rule:MF_01910}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
Displaying 13 items

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