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sw_10_scaffold_370

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_370_1

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comp(2..466)
DNA (465bp) protein (155aa)
Transcription initiation factor IIB n=1 Tax=uncultured archaeon A07HR60 RepID=V4XVK8_9ARCH
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archa
transcription initiation factor iib (tfiib)
sw_10_scaffold_370_2
unknown

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comp(438..686)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_10_scaffold_370_3
unknown

Not on your lists

918..1046
DNA (129bp) protein (43aa)

This feature has no annotations

sw_10_scaffold_370_4
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1156..1683
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI000361AAA8
Uncharacterized protein {ECO:0000313|EMBL:KIZ16592.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensis ATCC 27448.
mmyY; hypothetical protein
sw_10_scaffold_370_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2076..2840
DNA (765bp) protein (255aa)
IclR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXP7_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ27985.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
IclR family transcriptional regulator
sw_10_scaffold_370_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3265..3426
DNA (162bp) protein (54aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZT6_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ELZ28133.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex car
sw_10_scaffold_370_7
unknown

Not on your lists

comp(3856..4086)
DNA (231bp) protein (77aa)

This feature has no annotations

sw_10_scaffold_370_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4195..4980)
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXP3_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27980.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeomet
short-chain dehydrogenase/reductase SDR
sw_10_scaffold_370_9
Bordetella pertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5253..6032)
DNA (780bp) protein (260aa)
Uncharacterised protein {ECO:0000313|EMBL:CRE20872.1}; TaxID=520 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella pertussis.;"
sw_10_scaffold_370_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6055..6606
DNA (552bp) protein (184aa)
Methylmalonic acid semialdehyde dehydrogenase n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PD45_9EURY
Methylmalonic acid semialdehyde dehydrogenase {ECO:0000313|EMBL:ERG91497.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloqu
methylmalonate-semialdehyde dehydrogenase
sw_10_scaffold_370_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6841..7632)
DNA (792bp) protein (264aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN1_9EURY
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:ELZ27970.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum p
sw_10_scaffold_370_12
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7830..9059
DNA (1230bp) protein (410aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F3_HALTV
Gluconate dehydratase {ECO:0000313|EMBL:KDE60555.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
D-gluconate dehydratase
sw_10_scaffold_370_13
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

9691..10692
DNA (1002bp) protein (334aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:ACZ43579.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ACZ43579.1};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain AT
Monosaccharide-transporting ATPase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIK8_THET1
sw_10_scaffold_370_14
Thermofilum sp. 1807-2, Thermofilum, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

10698..11459
DNA (762bp) protein (254aa)
ABC transporter ATP-binding protein n=1 Tax=Thermofilum sp. 1910b RepID=S6A5W3_9CREN
ABC transporter ATP-binding protein {ECO:0000313|EMBL:AKG38485.1}; TaxID=1550241 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermofilaceae; Thermofilum.;" source="Thermofilum sp.
D-xylose transport ATP-binding protein XylG
sw_10_scaffold_370_15
Thermotoga neapolitana, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

11674..12765
DNA (1092bp) protein (364aa)
Sugar binding protein of ABC transporter n=2 Tax=Thermotoga RepID=B9KBM0_THENN
Sugar binding protein of ABC transporter
Sugar binding protein of ABC transporter {ECO:0000313|EMBL:ACM22416.1}; TaxID=309803 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga neapolitana (strain
sw_10_scaffold_370_16
unknown

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12870..13025
DNA (156bp) protein (52aa)

This feature has no annotations

sw_10_scaffold_370_17
unknown

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comp(13178..13378)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_10_scaffold_370_18
unknown

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13382..13504
DNA (123bp) protein (41aa)

This feature has no annotations

sw_10_scaffold_370_19
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13680..14126
DNA (447bp) protein (149aa)
Universal stress protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7H1_HALJP
Universal stress protein {ECO:0000313|EMBL:EMA29491.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 61
universal stress protein
sw_10_scaffold_370_20
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14242..15396
DNA (1155bp) protein (385aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F4_HALTV
alcohol dehydrogenase zinc-binding domain protein
Alcohol dehydrogenase zinc-binding domain protein {ECO:0000313|EMBL:ADB63201.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Halot
sw_10_scaffold_370_21
unknown

Not on your lists

comp(15386..15928)
DNA (543bp) protein (181aa)

This feature has no annotations

sw_10_scaffold_370_22
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15961..16392
DNA (432bp) protein (144aa)
hydroxypyruvate isomerase (EC:5.3.1.22)
Hydroxypyruvate isomerase {ECO:0000313|EMBL:AEH39052.1}; EC=5.3.1.22 {ECO:0000313|EMBL:AEH39052.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.
Hydroxypyruvate isomerase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDF8_HALXS
sw_10_scaffold_370_23
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16409..17056
DNA (648bp) protein (216aa)
Oxidoreductase domain protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P789_9EURY
oxidoreductase
Oxidoreductase domain protein {ECO:0000313|EMBL:EMA64710.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DS
sw_10_scaffold_370_24
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17111..17824)
DNA (714bp) protein (238aa)
Oxidoreductase domain-containing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXM3_9EURY
Oxidoreductase domain-containing protein {ECO:0000313|EMBL:ELZ27971.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeome
oxidoreductase domain-containing protein
sw_10_scaffold_370_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17821..18111)
DNA (291bp) protein (97aa)
oxidoreductase n=1 Tax=Halomicrobium katesii RepID=UPI000377F6D2
oxidoreductase domain-containing protein
Oxidoreductase domain protein {ECO:0000313|EMBL:ACV46459.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
sw_10_scaffold_370_26
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18229..19227
DNA (999bp) protein (333aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZY0_9EURY
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:ELZ27972.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
3-phosphoglycerate dehydrogenase
sw_10_scaffold_370_27
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19252..20058)
DNA (807bp) protein (269aa)
Aldo/keto reductase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXN5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01860.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_370_28
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20129..20977)
DNA (849bp) protein (283aa)
Zn-dependent hydrolase of the beta-lactamase fold-like protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1F1_HALTV
Zn-dependent hydrolase of the beta-lactamase fold-like protein
Zn-dependent hydrolase of the beta-lactamase fold-like protein {ECO:0000313|EMBL:ADB63198.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;"
sw_10_scaffold_370_29
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20970..21791)
DNA (822bp) protein (274aa)
Xylose isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZB9_9EURY
Xylose isomerase {ECO:0000313|EMBL:ELZ27973.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 1484
xylose isomerase
sw_10_scaffold_370_30
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21886..22863
DNA (978bp) protein (326aa)
Monooxygenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1G1_9EURY
Monooxygenase {ECO:0000313|EMBL:ELZ27984.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;
monooxygenase
Displaying items 1-30 of 35 in total

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