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sw_10_scaffold_4632

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_4632_1
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..304
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=M0A037_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY92115.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_10_scaffold_4632_2
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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297..1043
DNA (747bp) protein (249aa)
Putative copper binding protein n=2 Tax=Haloarcula RepID=Q5V701_HALMA
putative copper binding protein
Putative copper binding protein {ECO:0000313|EMBL:EMA27624.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
sw_10_scaffold_4632_3
unknown

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1201..1335
DNA (135bp) protein (45aa)

This feature has no annotations

sw_10_scaffold_4632_4
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1401..2438)
DNA (1038bp) protein (346aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WLJ8_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:ELY50257.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bang
NAD-dependent epimerase/dehydratase
sw_10_scaffold_4632_5
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(2874..3791)
DNA (918bp) protein (306aa)
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase {ECO:0000313|EMBL:AEN72609.1}; EC=6.2.1.12 {ECO:0000313|EMBL:AEN72609.1};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermacea
4-coumarate--CoA ligase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR
sw_10_scaffold_4632_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3788..4315)
DNA (528bp) protein (176aa)
4-coumarate--CoA ligase (EC:6.2.1.12) Tax=RBG_16_Gamma2_60_9_curated
4-coumarate--CoA ligase (EC:6.2.1.12)
AMP-dependent synthetase n=1 Tax=Salisaeta longa RepID=UPI0003B6F045
sw_10_scaffold_4632_7
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4305..4580)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L149_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27287.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
putative ester cyclase
sw_10_scaffold_4632_8
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4665..5021)
DNA (357bp) protein (119aa)
Putative transcriptional regulator, GntR family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYL1_HALTV
GntR family transcriptional regulator
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB59912.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
sw_10_scaffold_4632_9
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5588..6841
DNA (1254bp) protein (418aa)
FAD linked oxidase domain protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZHR2_9EURY
FAD linked oxidase domain protein {ECO:0000313|EMBL:ELY86010.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM
FAD linked oxidase domain protein
sw_10_scaffold_4632_10
unknown

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7042..7143
DNA (102bp) protein (34aa)

This feature has no annotations

sw_10_scaffold_4632_11

Not on your lists

comp(7214..7399)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MP91_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07665.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_10_scaffold_4632_12
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7418..7750)
DNA (333bp) protein (111aa)
Putative transcriptional regulator, GntR family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYL1_HALTV
GntR family transcriptional regulator
Putative transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB59912.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloter
sw_10_scaffold_4632_13
unknown

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7880..8092
DNA (213bp) protein (71aa)

This feature has no annotations

sw_10_scaffold_4632_14
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8363..9088
DNA (726bp) protein (242aa)
FAD linked oxidase domain protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYL6_HALTV
FAD linked oxidase
FAD linked oxidase domain protein {ECO:0000313|EMBL:ADB59917.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmen
Displaying 14 items

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