ggKbase home page

sw_10_scaffold_544

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_544_1
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(145..750)
DNA (606bp) protein (202aa)
Nucleic acid-binding protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M9W0_HALMO
Nucleic acid-binding protein {ECO:0000313|EMBL:EMA41195.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
sw_10_scaffold_544_2
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1079..1762
DNA (684bp) protein (228aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7F7_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AKH97420.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;"
type I phosphodiesterase/nucleotide pyrophosphatase
sw_10_scaffold_544_3
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1762..2610
DNA (849bp) protein (283aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K896_9EURY
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AKH97420.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;"
hypothetical protein
sw_10_scaffold_544_4
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2603..3574
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PM43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA71067.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
hypothetical protein
sw_10_scaffold_544_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3571..4701
DNA (1131bp) protein (377aa)
Group 1 glycosyl transferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KF70_HALAR
Group 1 glycosyl transferase {ECO:0000313|EMBL:EMA18470.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinens
group 1 glycosyl transferase
sw_10_scaffold_544_6

Not on your lists

comp(4743..5810)
DNA (1068bp) protein (356aa)
Glycosyl transferase, group 1 n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=A3DN36_STAMF
Uncharacterized protein {ECO:0000313|EMBL:KKM96797.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
group 1 glycosyl transferase
sw_10_scaffold_544_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5923..6570)
DNA (648bp) protein (216aa)
Type 11 methyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LGJ3_HALJP
Type 11 methyltransferase {ECO:0000313|EMBL:EMA32747.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6
type 11 methyltransferase
sw_10_scaffold_544_8
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6968..7846)
DNA (879bp) protein (293aa)
N-acetylgalactosamine-4-sulfatase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AJQ0_9EURY
N-acetylgalactosamine-4-sulfatase {ECO:0000313|EMBL:ELY97623.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 1
N-acetylgalactosamine-4-sulfatase.
sw_10_scaffold_544_9
unknown

Not on your lists

8601..9878
DNA (1278bp) protein (426aa)

This feature has no annotations

sw_10_scaffold_544_10
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9915..11024)
DNA (1110bp) protein (370aa)
Glycosyltransferase n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0IR84_MYCSM
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGB21348.1}; Flags: Precursor;; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegma
sw_10_scaffold_544_11
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(11230..12045)
DNA (816bp) protein (272aa)
Polysaccharide deacetylase n=5 Tax=Pelosinus fermentans RepID=I8SA07_9FIRM
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:EIW20986.1}; Flags: Precursor;; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinu
sw_10_scaffold_544_12
unknown

Not on your lists

comp(12042..13409)
DNA (1368bp) protein (456aa)

This feature has no annotations

sw_10_scaffold_544_13

Not on your lists

comp(13511..14398)
DNA (888bp) protein (296aa)
Methyltransferase FkbM family n=1 Tax=halophilic archaeon DL31 RepID=G2MP31_9ARCH
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:AEN07622.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_10_scaffold_544_14
unknown

Not on your lists

14405..14611
DNA (207bp) protein (69aa)

This feature has no annotations

sw_10_scaffold_544_15
unknown

Not on your lists

14559..15830
DNA (1272bp) protein (424aa)

This feature has no annotations

sw_10_scaffold_544_16
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16000..17562)
DNA (1563bp) protein (521aa)
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CCQ33135.1}; ATP-binding cassette subfamily B bacterial MsbA protein {ECO:0000313|EMBL:ERJ05393.1}; EC=3.6.3.- {ECO:0000313|EMBL:ERJ0539
ABC transporter, ATP-binding/permease protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGC1_9EURY
ABC transporter, ATP-binding/permease protein
Displaying 16 items

View Taxonomy