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sw_10_scaffold_650

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_650_1
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..421
DNA (420bp) protein (140aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L6T9_9EURY
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EMA28149.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Hal
pyridoxal-5'-phosphate-dependent protein subunit beta
sw_10_scaffold_650_2
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

424..1101
DNA (678bp) protein (226aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=122749
2-phospho-L-lactate guanylyltransferase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BSC8_9EURY
phospholactate guanylyltransferase
sw_10_scaffold_650_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1469..1723)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQR2_NATPD
hypothetical protein
MTH865 family protein {ECO:0000313|EMBL:CAI49532.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_10_scaffold_650_4
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1840..3507
DNA (1668bp) protein (556aa)
Long-chain-fatty-acid--CoA ligase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1U2_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG00807.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_10_scaffold_650_5
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3753..4088)
DNA (336bp) protein (112aa)
50S ribosomal protein L12 n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WZE6_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali D
rpl12p; 50S ribosomal protein L12P
sw_10_scaffold_650_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4147..5169)
DNA (1023bp) protein (341aa)
50S ribosomal protein L10 n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR77_HALBP
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Halofera
sw_10_scaffold_650_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5172..5783)
DNA (612bp) protein (204aa)
50S ribosomal protein L1 n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQI3_HALUD
rpl1P; 50S ribosomal protein L1P
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;"
sw_10_scaffold_650_8
unknown

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5968..6699
DNA (732bp) protein (244aa)

This feature has no annotations

sw_10_scaffold_650_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6731..7384)
DNA (654bp) protein (218aa)
DNA binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N480_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA51914.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
Bacterio-opsin activator HTH domain protein
sw_10_scaffold_650_10
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7381..8103)
DNA (723bp) protein (241aa)
Thioredoxin reductase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KLG6_9EURY
Thioredoxin reductase {ECO:0000313|EMBL:EMA21763.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33
trxB4; thioredoxin reductase
sw_10_scaffold_650_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8253..8522)
DNA (270bp) protein (90aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L055_9EURY
N2,N2-dimethylguanosine tRNA methyltransferase
sw_10_scaffold_650_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8491..9258)
DNA (768bp) protein (256aa)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
tRNA (guanine-N(2)-)-methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MG71_9EURY
sw_10_scaffold_650_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9418..9849
DNA (432bp) protein (144aa)
Uncharacterized conserved protein UCP022079 n=1 Tax=Halobacterium sp. DL1 RepID=G4IHB3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04382.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_10_scaffold_650_trna_1
unknown

Not on your lists

10004..10076
DNA (73bp)
transferRNA
sw_10_scaffold_650_14
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11171..12091
DNA (921bp) protein (307aa)
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GV56_9EURY
DNA adenine methylase {ECO:0000313|EMBL:ELZ74749.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_10_scaffold_650_15
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12099..12560)
DNA (462bp) protein (154aa)
type II restriction-modification system, restriction enzyme (EC:3.1.21.4)
Uncharacterized protein n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GT80_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ74747.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_10_scaffold_650_16
unknown

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12629..12925
DNA (297bp) protein (99aa)

This feature has no annotations

Displaying 17 items

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