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sw_10_scaffold_749

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_749_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..190
DNA (189bp) protein (63aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4F2_9EURY
hypothetical protein
sw_10_scaffold_749_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(268..549)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NJE7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56805.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_749_3
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

679..1023
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NI67_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56804.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_10_scaffold_749_4
unknown

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comp(1103..1240)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_10_scaffold_749_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1302..1856)
DNA (555bp) protein (185aa)
IS240-type transposase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPC2_NATM8
IS240-type transposase
ISH14-type transposase ISNamo7 {ECO:0000313|EMBL:CCQ35868.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_10_scaffold_749_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2079..2897
DNA (819bp) protein (273aa)
Zinc finger SWIM domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIY7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05615.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_10_scaffold_749_7
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2912..3625)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003622006
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ68904.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_10_scaffold_749_8
Paenibacillus sp. FSL R5-0912, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3649..3999)
DNA (351bp) protein (117aa)
Thioredoxin n=1 Tax=Chlamydophila abortus (strain DSM 27085 / S26/3) RepID=Q5L731_CHLAB
trxA; thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1536771 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-0912.;"
sw_10_scaffold_749_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4117..4743
DNA (627bp) protein (209aa)
DNA-3-methyladenine glycosylase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JGI7_HALVA
DNA-3-methyladenine glycosylase {ECO:0000313|EMBL:EMA08086.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismor
DNA N-glycosylase / DNA lyase
sw_10_scaffold_749_10
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4818..6695)
DNA (1878bp) protein (626aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 PF81_9DELT">RepID=S9PF81_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX61027.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cy
sw_10_scaffold_749_11
unknown

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comp(6696..7250)
DNA (555bp) protein (185aa)

This feature has no annotations

sw_10_scaffold_749_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7352..7870
DNA (519bp) protein (173aa)
IS240-type transposase ISNph1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN94_NATPD
transposase
ISH14-type transposase ISNph1 {ECO:0000313|EMBL:CAI50410.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
Displaying 12 items

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