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sw_10_scaffold_790

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_790_1
RIFOXYA12_FULL_WOR_1_43_27_curated, WOR-1, Bacteria

Not on your lists

3..242
DNA (240bp) protein (80aa)
SerA; D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RIFOXYA12_FULL_WOR_1_43_27_curated
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Natronococcus occultus SP4 RepID=L0K3N5_9EURY
sw_10_scaffold_790_2
unknown

Not on your lists

comp(339..1445)
DNA (1107bp) protein (369aa)

This feature has no annotations

sw_10_scaffold_790_3
unknown

Not on your lists

comp(1435..2298)
DNA (864bp) protein (288aa)

This feature has no annotations

sw_10_scaffold_790_4
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2303..3079)
DNA (777bp) protein (259aa)
Subtilase family protein id=1786886 bin=GWE2_Bacteroidetes_32_14 species=Bizionia argentinensis genus=Bizionia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
peptidase M4, thermolysin Tax=GWE2_Bacteroidetes_32_14_curated
sw_10_scaffold_790_5
Siansivirga zeaxanthinifaciens, Siansivirga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3076..5916)
DNA (2841bp) protein (947aa)
Laminin G sub domain 2 n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4AY48_KROS4
MAM protein
MAM protein {ECO:0000313|EMBL:AJR03869.1}; TaxID=1454006 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Siansivirga.;" source="Siansivirga zeaxanthinifaciens CC
sw_10_scaffold_790_6
unknown

Not on your lists

comp(6049..6309)
DNA (261bp) protein (87aa)

This feature has no annotations

sw_10_scaffold_790_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6396..7385)
DNA (990bp) protein (330aa)
Na+/Ca2+-exchanging protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NES4_9EURY
Na+/Ca2+-exchanging protein {ECO:0000313|EMBL:EMA55579.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
Ca2+/Na+ antiporter
sw_10_scaffold_790_8
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7552..7941
DNA (390bp) protein (130aa)
Peptide methionine sulfoxide reductase msrB n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BRP7_9EURY
methionine-R-sulfoxide reductase
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:AGB30985.1}; Peptide methionine sulfoxide reductase msrB {ECO:0000313|EMBL:ELY80632.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; N
sw_10_scaffold_790_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7981..8190
DNA (210bp) protein (70aa)
30S ribosomal protein S17e n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX32_9EURY
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus
30S ribosomal protein S17e
sw_10_scaffold_790_10
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(8350..9513)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LHE6_HALWC
Putative ATPase {ECO:0000313|EMBL:AKG91697.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus ahangari.;"
hypothetical protein
sw_10_scaffold_790_11
unknown

Not on your lists

comp(9633..9881)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_10_scaffold_790_12
uncultured_archaeon_J07HX5, HalobacterialesCP, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10050..10589)
DNA (540bp) protein (180aa)
id=24654455 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
id=24654455 bin=uncultured_archaeon_J07HX5 tax=uncultured_archaeon_J07HX5
sw_10_scaffold_790_13
unknown

Not on your lists

comp(10798..10947)
DNA (150bp) protein (50aa)

This feature has no annotations

sw_10_scaffold_790_14
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11017..11361
DNA (345bp) protein (115aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=519442 species="Archaea;
Tryptophan--tRNA ligase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQT9_HALUD
sw_10_scaffold_790_15
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11527..12342
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9G922_SORC5
hypothetical protein Tax=CG_Delta_07
hypothetical protein
sw_10_scaffold_790_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12778..13158
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NW74_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48203.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_10_scaffold_790_17
Candidatus Parvarchaeum acidophilus, Candidatus Parvarchaeum, Parvarchaeota, Archaea

Not on your lists

13327..14406
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WP10_9EURY
Putative uncharacterized protein {ECO:0000313|EMBL:EFD92724.1}; TaxID=662762 species="Archaea; Parvarchaeota; Candidatus Parvarchaeum.;" source="Candidatus Parvarchaeum acidophilus ARMAN-5.;"
hypothetical protein
sw_10_scaffold_790_18
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14403..15065)
DNA (663bp) protein (221aa)
HAD-superfamily hydrolase n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DK15_9EURY
HAD-superfamily hydrolase {ECO:0000313|EMBL:ELZ35851.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 1024
gph; haloacid dehalogenase superfamily protein
sw_10_scaffold_790_19
unknown

Not on your lists

comp(15247..15411)
DNA (165bp) protein (55aa)

This feature has no annotations

sw_10_scaffold_790_20
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16087..16683
DNA (597bp) protein (199aa)
Flagellin domain-containing protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P7X5_9EURY
Flagellin {ECO:0000256|RuleBase:RU361282}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560.;"
flagellin A1
sw_10_scaffold_790_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17372..18511)
DNA (1140bp) protein (380aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPH5_9EURY
Rieske (2Fe-2S) iron-sulfur domain protein {ECO:0000313|EMBL:EFW93458.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladap
ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase
sw_10_scaffold_790_22
unknown

Not on your lists

comp(18685..18924)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_10_scaffold_790_23
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18917..19327)
DNA (411bp) protein (137aa)
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
site-specific DNA-methyltransferase (EC:2.1.1.-)
DNA modification methylase n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1N2F3_9EURY
sw_10_scaffold_790_24
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19380..19763)
DNA (384bp) protein (128aa)
site-specific DNA-methyltransferase (EC:2.1.1.-); K00599 [EC:2.1.1.-] id=24628734 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Modification methylase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.113 {ECO:0000256|RuleBase:RU362026};; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloq
site-specific DNA-methyltransferase (EC:2.1.1.-)
sw_10_scaffold_790_25
Candidatus Nanosalinarum sp. J07AB56, Candidatus Nanosalinarum, Nanohaloarchaea, Nanohaloarchaeota, Archaea

Not on your lists

19865..20290
DNA (426bp) protein (142aa)
ADP-ribose pyrophosphatase; K03207 colanic acid biosynthesis protein WcaH [EC:3.6.1.-] id=18316085 bin=Nanosalinarum tax=Nanosalinarum
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EGQ39863.1}; TaxID=889962 species="Archaea; Nanohaloarchaeota; Nanohaloarchaea; Candidatus Nanosalinarum.;" source="Nanosalinarum sp. (strain J07AB56).;"
GDP-mannose mannosyl hydrolase
sw_10_scaffold_790_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20330..20794)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CHE2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ22661.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_790_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20779..21465)
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNN4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46030.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_790_28
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

21938..22243
DNA (306bp) protein (102aa)
Putative type II secretion system protein D n=1 Tax=Leptospirillum ferrooxidans (strain C2-3) RepID=I0ILS0_LEPFC
type II secretion system protein D
Putative type II secretion system protein D {ECO:0000313|EMBL:BAM06219.1}; TaxID=1162668 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferroox
Displaying 28 items

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