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sw_10_scaffold_852

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_852_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..578)
DNA (576bp) protein (192aa)
helicase (EC:3.6.1.-)
DEAD/DEAH box helicase {ECO:0000313|EMBL:CAI50029.1}; EC=3.6.4.- {ECO:0000313|EMBL:CAI50029.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
DEAD/DEAH box helicase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC2_NATPD
sw_10_scaffold_852_2
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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748..1344
DNA (597bp) protein (199aa)
Uncharacterized protein {ECO:0000313|EMBL:KDE57432.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
TATA-box-binding protein id=5800078 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transcription factor
sw_10_scaffold_852_3
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1362..4190)
DNA (2829bp) protein (943aa)
Probable restriction/modification enzyme {ECO:0000313|EMBL:CAJ53372.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAJ53372.1};; EC=3.1.21.- {ECO:0000313|EMBL:CAJ53372.1};; TaxID=362976 species="Archaea; Euryarchae
Probable restriction/modification enzyme n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18F86_HALWD
type II restriction/modification enzyme
sw_10_scaffold_852_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4154..5371)
DNA (1218bp) protein (406aa)
Probable restriction/modification enzyme {ECO:0000313|EMBL:CAI50028.1}; EC=2.1.1.- {ECO:0000313|EMBL:CAI50028.1};; EC=3.1.21.- {ECO:0000313|EMBL:CAI50028.1};; TaxID=348780 species="Archaea; Euryarchae
Probable restriction/modification enzyme n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC3_NATPD
restriction/modification enzyme
sw_10_scaffold_852_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5374..6963)
DNA (1590bp) protein (530aa)
ATP-dependent helicase {ECO:0000313|EMBL:CAI50027.1}; EC=3.6.4.- {ECO:0000313|EMBL:CAI50027.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
ATP-dependent helicase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC4_NATPD
ATP-dependent helicase
sw_10_scaffold_852_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6993..8198)
DNA (1206bp) protein (402aa)
ATP-dependent helicase {ECO:0000313|EMBL:CAI50027.1}; EC=3.6.4.- {ECO:0000313|EMBL:CAI50027.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronom
ATP-dependent helicase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPC4_NATPD
ATP-dependent helicase
sw_10_scaffold_852_7
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8230..8964)
DNA (735bp) protein (245aa)
DNA polymerase sliding clamp n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CHW7_9EURY
Proliferating cell nuclear antigen, PCNA
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1227488 species="Arch
sw_10_scaffold_852_8
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8968..10665)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZAY6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY83640.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
sw_10_scaffold_852_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11274..11450
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMS7_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50580.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_10_scaffold_852_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(11458..12015)
DNA (558bp) protein (186aa)
sfuB; iron ABC transporter permease; K02011 iron(III) transport system permease protein id=24630130 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
ABC-type Fe3+ transport system, permease component {ECO:0000313|EMBL:ERG92408.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="H
sfuB; ABC-type iron(III) transport system, permease
sw_10_scaffold_852_11
unknown

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12065..12529
DNA (465bp) protein (155aa)

This feature has no annotations

sw_10_scaffold_852_12
unknown

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12536..12916
DNA (381bp) protein (127aa)

This feature has no annotations

sw_10_scaffold_852_13
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(12913..14016)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SUU6_9EURY
Iron ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKF39039.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
putative iron-III ABC transporter periplasmic substrate-binding protein
sw_10_scaffold_852_14
unknown

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comp(14018..15853)
DNA (1836bp) protein (612aa)

This feature has no annotations

sw_10_scaffold_852_15
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(15856..18957)
DNA (3102bp) protein (1034aa)
Peptidase M14 carboxypeptidase A n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X856_9EURY
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:ELY56818.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amyloly
peptidase M14 carboxypeptidase A
sw_10_scaffold_852_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19057..19245)
DNA (189bp) protein (63aa)
Homolog to mandelate racemase / homolog to muconate lactonizing enzyme n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRB2_NATPD
mandelate racemase/muconate lactonizing family protein
Homolog to dipeptide epimerase {ECO:0000313|EMBL:CAI49331.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
Displaying 16 items

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