ggKbase home page

sw_10_scaffold_1895_1

Organism: SW_10_UNK

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Location: 582..938

Top 3 Functional Annotations

Value Algorithm Source
TRAM domain-containing protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DZ24_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 121.0
  • Bit_score: 141
  • Evalue 4.20e-31
putative RNA-binding protein, contains TRAM domain similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 118.0
  • Bit_score: 141
  • Evalue 2.00e-31
TRAM domain-containing protein {ECO:0000313|EMBL:ELZ40756.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensi similarity UNIPROT
DB: UniProtKB
  • Identity: 60.3
  • Coverage: 121.0
  • Bit_score: 141
  • Evalue 5.90e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Halorubrum californiense → Halorubrum → Haloferacales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 357
ATGGTCGAGATTCCAGATTCCCTTCGCTCTGTCTTCAGTGCGACTGTCCACGAGCGAGACGGCAGATACGTCGTTGAAATCCCAGCCGACGAAGTCACCCACGACGCCGTCACAGTCGGCGAAACGTATCGTGTTGCGCTTCTTGATACACCTCCTGCGAGAGCATCCGCTGAGCAGGATGCATCGCAACCATCTCAGACACAGCGACGGGATCGGCAGCACTCCCCTGGGCCACCAGTCGCTGAGGGCGAGGTACGTGAGGTAACGATTGAGACGATCGGCGACCAAGGAGACGGTATTGCAAAAGTCGAACGCGGCTACGTCGTGATCGTTCCTGAGGTGCAACCAGGGCAATAG
PROTEIN sequence
Length: 119
MVEIPDSLRSVFSATVHERDGRYVVEIPADEVTHDAVTVGETYRVALLDTPPARASAEQDASQPSQTQRRDRQHSPGPPVAEGEVREVTIETIGDQGDGIAKVERGYVVIVPEVQPGQ*