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SW_10_UNK

In projects: SW_10  |  diaphorachaeota

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 21.60 Longest contig: 134.98 Kbp Bin length: 42.41 Mbp GC content: 58.85 %
Contigs count: 17394 Features count: 56831 rRNAs count: 22 tRNAs count: 557

Genome completeness

megabin RP 51 / 55 MC: 46 BSCG 45 / 51 MC: 40 ASCG 38 / 38 MC: 37
Displaying items 751-800 of 17394 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_10_scaffold_6185
Species: Salinibacter ruber (66.67%)
3 2177 bp 59.76 31.92 42.99
sw_10_scaffold_6186 3 2177 bp 53.51 5.14 42.99
sw_10_scaffold_18070
Species: Natronomonas pharaonis (50%)
2 2111 bp 64.85 58.60 43.06
sw_10_scaffold_25498 2 1616 bp 49.26 5.69 43.07
sw_10_scaffold_7760 2 1894 bp 53.64 6.34 43.08
sw_10_scaffold_3225 4 4149 bp 52.23 6.31 43.09
sw_10_scaffold_32026
Species: Halogranum salarium (100%)
1 1524 bp 62.40 8.73 43.11
sw_10_scaffold_36877 2 1148 bp 55.66 10.98 43.12
sw_10_scaffold_17208
Order: Halobacteriales (66.67%)
3 1621 bp 62.68 10.67 43.12
sw_10_scaffold_2641 4 5665 bp 53.57 6.00 43.16
sw_10_scaffold_37788
Species: Natronorubrum tibetense (50%)
2 1049 bp 55.96 7.15 43.18
sw_10_scaffold_17864
Species: Halococcus saccharolyticus (100%)
1 1083 bp 56.88 7.85 43.21
sw_10_scaffold_34551
Species: RBG_13_Woesearchaeota_36_6_curated (50%)
2 1187 bp 51.81 5.73 43.22
sw_10_scaffold_19383 1 1020 bp 44.22 6.37 43.24
sw_10_scaffold_8310 4 1811 bp 53.89 14.52 43.24
sw_10_scaffold_15237 2 1214 bp 35.26 6.75 43.25
sw_10_scaffold_9708
Genus: Halorubrum (50%)
4 2781 bp 60.16 27.40 43.26
sw_10_scaffold_21727
Species: Halorubrum sp. J07HR59 (50%)
2 1685 bp 55.43 38.75 43.26
sw_10_scaffold_20040 2 1574 bp 21.16 6.04 43.27
sw_10_scaffold_14327 3 1747 bp 49.80 6.30 43.27
sw_10_scaffold_12509 2 1386 bp 51.95 10.68 43.29
sw_10_scaffold_6459 2 2119 bp 48.84 5.71 43.32
sw_10_scaffold_4754 3 2576 bp 52.33 29.00 43.32
sw_10_scaffold_8778 2 1745 bp 58.80 6.25 43.32
sw_10_scaffold_7151
Species: Chondrus crispus (50%)
2 2582 bp 52.13 6.82 43.34
sw_10_scaffold_19616 1 1010 bp 52.08 5.54 43.37
sw_10_scaffold_18242
Class: Nanohaloarchaea (66.67%)
3 2711 bp 40.72 7.64 43.38
sw_10_scaffold_11782 3 2330 bp 51.42 6.44 43.39
sw_10_scaffold_12967 2 1354 bp 37.81 5.98 43.43
sw_10_scaffold_28898 3 1278 bp 53.91 17.14 43.43
sw_10_scaffold_16252 2 1160 bp 54.91 6.90 43.45
sw_10_scaffold_12977
Species: Natronomonas moolapensis (100%)
1 1353 bp 50.78 19.81 43.46
sw_10_scaffold_17874
Species: Halobacterium sp. DL1 (50%)
2 1083 bp 53.74 6.56 43.49
sw_10_scaffold_15005 1 1227 bp 40.75 27.87 43.52
sw_10_scaffold_36254 2 1351 bp 45.60 6.81 43.52
sw_10_scaffold_14663
Species: Burkholderia sp. CCGE1002 (50%)
2 1247 bp 51.48 22.77 43.54
sw_10_scaffold_22058
Species: uncultured marine group II/III euryarchaeote AD1000_04_F01 (50%)
2 1598 bp 59.57 7.20 43.55
sw_10_scaffold_35705
Species: Halococcus saccharolyticus (100%)
1 1108 bp 66.61 18.23 43.59
sw_10_scaffold_36601
Species: GWF2_Bacteroidetes_38_335_curated (100%)
1 1293 bp 36.66 4.41 43.62
sw_10_scaffold_16730 3 1134 bp 46.38 4.23 43.65
sw_10_scaffold_6061 5 4714 bp 60.16 36.06 43.66
sw_10_scaffold_11774
Class: Halobacteria (66.67%)
3 1442 bp 53.54 10.26 43.69
sw_10_scaffold_8645
Species: Salinibacter ruber (66.67%)
3 1763 bp 59.84 26.43 43.73
sw_10_scaffold_19344 3 1021 bp 50.05 10.09 43.78
sw_10_scaffold_13302
Species: Natronobacterium gregoryi (50%)
2 1946 bp 61.46 5.65 43.78
sw_10_scaffold_18214
Species: Halococcus salifodinae (100%)
1 1068 bp 53.37 10.39 43.82
sw_10_scaffold_8135 3 2752 bp 45.97 6.72 43.82
sw_10_scaffold_15588 3 1195 bp 62.93 7.95 43.85
sw_10_scaffold_13462
Species: Gloeocapsa sp. PCC 7428 (50%)
2 1320 bp 49.92 31.21 43.86
sw_10_scaffold_16446 2 1149 bp 24.46 6.61 43.86
Displaying items 751-800 of 17394 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.