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sw_10_scaffold_0

Search features with annotation key words

Displaying items 1-30 of 146 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_0_1
unknown

Not on your lists

176..802
DNA (627bp) protein (209aa)

This feature has no annotations

sw_10_scaffold_0_2
unknown

Not on your lists

comp(799..1275)
DNA (477bp) protein (159aa)

This feature has no annotations

sw_10_scaffold_0_3

Not on your lists

comp(1360..1875)
DNA (516bp) protein (172aa)
Heavy metal transport/detoxification protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKM7_9ARCH
heavy metal transport/detoxification protein
Heavy metal transport/detoxification protein {ECO:0000313|EMBL:AEN04975.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_10_scaffold_0_4
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1922..4213)
DNA (2292bp) protein (764aa)
Zinc-transporting ATPase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KQF1_HALAR
Zinc-transporting ATPase {ECO:0000313|EMBL:EMA23517.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis D
zntA2; zinc-transporting ATPase
sw_10_scaffold_0_5
unknown

Not on your lists

comp(4272..4565)
DNA (294bp) protein (98aa)

This feature has no annotations

sw_10_scaffold_0_6
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4653..4862)
DNA (210bp) protein (70aa)
heavy metal transport/detoxification protein; K07213 copper chaperone
Tax=BJP_08E140C01_Syntrophobacterales_43_19
sw_10_scaffold_0_7
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4978..6018
DNA (1041bp) protein (347aa)
phosphopantetheine adenylyltransferase/unknown domain fusion protein (EC:2.7.7.3)
Uncharacterized protein n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T9U0_9EURY
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_0_8
unknown

Not on your lists

6470..7036
DNA (567bp) protein (189aa)

This feature has no annotations

sw_10_scaffold_0_9
unknown

Not on your lists

comp(7286..8497)
DNA (1212bp) protein (404aa)

This feature has no annotations

sw_10_scaffold_0_10
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8611..8823
DNA (213bp) protein (71aa)
Twin arginine translocation system subunit TatAt n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0GYN8_9EURY
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Hal
tatAt; twin arginine translocation system subunit TatAt
sw_10_scaffold_0_11

Not on your lists

8823..9305
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0002D90C68
Flavin reductase like domain protein {ECO:0000313|EMBL:AIA18840.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
sw_10_scaffold_0_12
gamma proteobacterium HTCC5015, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9673..10494)
DNA (822bp) protein (274aa)
Sugar fermentation stimulation protein homolog n=1 Tax=gamma proteobacterium HTCC5015 RepID=B5JUT3_9GAMM
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=391615 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HTCC5015.;"
sugar fermentation stimulation protein
sw_10_scaffold_0_13
Methanosarcina sp. 1.H.A.2.2, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10485..11537)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQH0_METAC
Hydrolase {ECO:0000313|EMBL:KKH48809.1}; TaxID=1483601 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 1.H.A.2.2.;
hypothetical protein
sw_10_scaffold_0_14
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

11654..12529
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Arthrobacter sp. SJCon RepID=L8TQP1_9MICC id=5225926 bin=16ft_combo_ws3_JS1 species=Arthrobacter sp. SJCon genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein Tax=RBG_16_RIF_WS3X_71_46_curated
multidrug transporter
sw_10_scaffold_0_15
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(12543..13037)
DNA (495bp) protein (165aa)
AsnC family transcriptional regulator Tax=RBG_13_Aminicenantes_63_10_curated
hypothetical protein id=8266818 bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
AsnC family transcriptional regulator
sw_10_scaffold_0_16
unknown

Not on your lists

13185..13382
DNA (198bp) protein (66aa)

This feature has no annotations

sw_10_scaffold_0_17
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13496..14857
DNA (1362bp) protein (454aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
glutamine synthetase, type I (EC:6.3.1.2)
glutamine synthetase n=1 Tax=Halorubrum sp. T3 RepID=UPI00037FB4E9
sw_10_scaffold_0_18
unknown

Not on your lists

15333..15563
DNA (231bp) protein (77aa)

This feature has no annotations

sw_10_scaffold_0_19
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15556..16719)
DNA (1164bp) protein (388aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI48163.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI48163.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUL7_NATPD
signal-transducing histidine kinase
sw_10_scaffold_0_20
unknown

Not on your lists

comp(16716..16886)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_10_scaffold_0_21
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17010..17819
DNA (810bp) protein (270aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WKL1_METH6
Phenazine biosynthesis protein PhzF family
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:AET63490.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="M
sw_10_scaffold_0_22
unknown

Not on your lists

comp(17820..19070)
DNA (1251bp) protein (417aa)

This feature has no annotations

sw_10_scaffold_0_23
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

19199..20392
DNA (1194bp) protein (398aa)
3-ketoacyl-CoA thiolase / Acetyl-CoA acetyltransferase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T948_9EURY
3-ketoacyl-CoA thiolase / Acetyl-CoA acetyltransferase
3-ketoacyl-CoA thiolase / Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:AGN27215.1}; TaxID=1295009 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae;
sw_10_scaffold_0_24
unknown

Not on your lists

20588..20830
DNA (243bp) protein (81aa)

This feature has no annotations

sw_10_scaffold_0_25
unknown

Not on your lists

comp(20854..22581)
DNA (1728bp) protein (576aa)

This feature has no annotations

sw_10_scaffold_0_26
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22689..23105
DNA (417bp) protein (139aa)
Response regulator receiver n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LAC6_9EURY
Response regulator receiver {ECO:0000313|EMBL:EMA29414.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens
response regulator receiver protein
sw_10_scaffold_0_27
unknown

Not on your lists

23264..23542
DNA (279bp) protein (93aa)

This feature has no annotations

sw_10_scaffold_0_28
unknown

Not on your lists

comp(23547..24944)
DNA (1398bp) protein (466aa)

This feature has no annotations

sw_10_scaffold_0_29
unknown

Not on your lists

25055..25546
DNA (492bp) protein (164aa)

This feature has no annotations

sw_10_scaffold_0_30
Verrucomicrobiae bacterium DG1235, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

25600..26796
DNA (1197bp) protein (399aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=382464 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.;" source="Verruco
ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQD0_9BACT
histidine kinase response regulator hybrid protein
Displaying items 1-30 of 146 in total

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