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sw_10_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_12_trna_1
unknown

Not on your lists

comp(295..365)
DNA (71bp)
transferRNA
sw_10_scaffold_12_1
unknown

Not on your lists

1099..1365
DNA (267bp) protein (89aa)

This feature has no annotations

sw_10_scaffold_12_2
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1524..2660
DNA (1137bp) protein (379aa)
UPI0003D1A9FB related cluster n=1 Tax=unknown RepID=UPI0003D1A9FB
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Meth
cell division protein FtsZ
sw_10_scaffold_12_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2895..4436
DNA (1542bp) protein (514aa)
Succinate-semialdehyde dehydrogenase (NAD(P)+) n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRQ5_KORVE
succinate-semialdehyde dehydrogenase (NAD(P)+)
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (stra
sw_10_scaffold_12_4
unknown

Not on your lists

4494..4718
DNA (225bp) protein (75aa)

This feature has no annotations

sw_10_scaffold_12_5
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4801..5211
DNA (411bp) protein (137aa)
CheY-like receiver protein n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZP58_9PROT
CheY-like receiver protein {ECO:0000313|EMBL:EME69082.1}; TaxID=1244869 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magneto
response regulator receiver protein
sw_10_scaffold_12_6
unknown

Not on your lists

5336..5569
DNA (234bp) protein (78aa)

This feature has no annotations

sw_10_scaffold_12_7
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5622..8150
DNA (2529bp) protein (843aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=247490 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" s
Two-component sensor kinase n=1 Tax=planctomycete KSU-1 RepID=I3IR31_9PLAN
PAS/PAC sensor signal transduction histidine kinase
sw_10_scaffold_12_8
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8143..8559
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037CF52C
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADW67767.1}; TaxID=1198114 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola
sw_10_scaffold_12_9
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(8563..9795)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7P9_UNCMA
transcriptional regulator TrmB Tax=RBG_16_Archaea_50_20_curated
putative transcriptional regulator, TrmB
sw_10_scaffold_12_10
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(9792..10190)
DNA (399bp) protein (133aa)
Response regulator receiver n=1 Tax=Nocardioides sp. CF8 RepID=R7XRT8_9ACTO
multi-sensor signal transduction histidine kinase Tax=CG_Arma_01
response regulator receiver domain-containing protein
sw_10_scaffold_12_11
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

comp(10256..11218)
DNA (963bp) protein (321aa)
korB; 2-oxoglutarate synthase subunit beta (EC:1.2.7.3)
2-oxoglutarate synthase subunit beta {ECO:0000313|EMBL:AFU59776.1}; EC=1.2.7.3 {ECO:0000313|EMBL:AFU59776.1};; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitro
2-oxoglutarate synthase subunit beta n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IEJ8_NITGG
sw_10_scaffold_12_12
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

comp(11221..13152)
DNA (1932bp) protein (644aa)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha (EC:1.2.7.3)
2-oxoglutarate ferredoxin oxidoreductase subunit alpha {ECO:0000313|EMBL:BAJ48839.1}; EC=1.2.7.3 {ECO:0000313|EMBL:BAJ48839.1};; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchae
2-oxoglutarate ferredoxin oxidoreductase subunit alpha n=3 Tax=Archaea RepID=E6N970_9ARCH
sw_10_scaffold_12_13
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

13367..14146
DNA (780bp) protein (260aa)
Putative membrane protein n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9RD63_STRCO
SCF56.03; hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_12_14
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14400..15572
DNA (1173bp) protein (391aa)
Alanine racemase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CBD6_9SPHN
Alanine racemase {ECO:0000313|EMBL:AJR22720.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
alanine racemase
sw_10_scaffold_12_15
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15675..16514)
DNA (840bp) protein (280aa)
Glucodextranase N n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q6X1_CATAD
glucodextranase N
Glucodextranase N {ECO:0000313|EMBL:ACU75984.1}; Flags: Precursor;; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphi
sw_10_scaffold_12_16
unknown

Not on your lists

comp(16529..16771)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_10_scaffold_12_17
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17043..17300)
DNA (258bp) protein (86aa)
Putative nuclease n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IGB9_9EURY
Putative nuclease {ECO:0000313|EMBL:ELZ95092.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
hypothetical protein
sw_10_scaffold_12_18
unknown

Not on your lists

comp(17598..18671)
DNA (1074bp) protein (358aa)

This feature has no annotations

sw_10_scaffold_12_19
unknown

Not on your lists

comp(18802..19401)
DNA (600bp) protein (200aa)

This feature has no annotations

sw_10_scaffold_12_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19586..20623
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM10_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46701.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_12_21
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20742..21893
DNA (1152bp) protein (384aa)
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:EGK14573.1}; EC=1.13.11.5 {ECO:0000313|EMBL:EGK14573.1};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmo
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
Homogentisate 12-dioxygenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U2C5_9CHLR
sw_10_scaffold_12_22
Alcanivorax sp. PN-3, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22724..24091
DNA (1368bp) protein (456aa)
Ser/Thr phosphatase n=1 Tax=Alcanivorax sp. PN-3 RepID=U7HW99_9GAMM
Ser/Thr phosphatase {ECO:0000313|EMBL:ERS13381.1}; TaxID=1397526 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax sp. PN-
ser/Thr protein phosphatase family protein
sw_10_scaffold_12_23
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24167..26221
DNA (2055bp) protein (685aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB91530.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
sw_10_scaffold_12_24
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26562..27851
DNA (1290bp) protein (430aa)
cytochrome P450 n=1 Tax=Maricaulis sp. JL2009 RepID=UPI00039B4FBE
fatty acid alpha hydroxylase, cytochrome P450
Fatty acid alpha hydroxylase, cytochrome P450 {ECO:0000313|EMBL:ABG61190.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" sour
sw_10_scaffold_12_25
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

27914..28333
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000364138F
hypothetical protein Tax=RBG_13_Ignavibacteria_36_8_curated
hypothetical protein
sw_10_scaffold_12_26
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

28357..29433
DNA (1077bp) protein (359aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AX61_RUBXD
iron-containing alcohol dehydrogenase
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:ABG04017.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
sw_10_scaffold_12_27
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

29559..30029
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H553_SALRM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
sw_10_scaffold_12_28
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

30044..30484
DNA (441bp) protein (147aa)
hypothetical protein VspiD_26440 n=1 Tax=Verrucomicrobium spinosum DSM 4136 RepID=UPI000174510E id=1246150 bin=RBG9 species=Verrucomicrobium spinosum genus=Verrucomicrobium taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=RBG9 organism_group=Chloroflexi
hypothetical protein Tax=RBG_16_Chloroflexi_48_8_curated
hypothetical protein
sw_10_scaffold_12_29
unknown

Not on your lists

30609..30728
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying items 1-30 of 98 in total

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