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sw_10_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 184 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_3_1
unknown

Not on your lists

336..779
DNA (444bp) protein (148aa)

This feature has no annotations

sw_10_scaffold_3_2
unknown

Not on your lists

comp(780..2393)
DNA (1614bp) protein (538aa)

This feature has no annotations

sw_10_scaffold_3_3
RBG_13_RIF08_66_14_curated, RIF8, Bacteria

Not on your lists

comp(2753..3937)
DNA (1185bp) protein (395aa)
metE3; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (EC:2.1.1.14); K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RBG_13_RIF0
methionine synthase (B12-independent) (EC:2.1.1.14)
Methionine synthase (B12-independent) n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXS0_RUBXD
sw_10_scaffold_3_4
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3934..4908)
DNA (975bp) protein (325aa)
Cobalamin-independent synthase MetE-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXR9_RUBXD
cobalamin-independent synthase MetE-like protein
Cobalamin-independent synthase MetE-like protein {ECO:0000313|EMBL:ABG03809.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubr
sw_10_scaffold_3_5
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(4913..5881)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00036C61B7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
hypothetical protein
sw_10_scaffold_3_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6015..6590)
DNA (576bp) protein (192aa)
Transcriptional regulator, XRE family n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6P8_HALXS
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:AEH37789.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis
sw_10_scaffold_3_7
unknown

Not on your lists

6708..7103
DNA (396bp) protein (132aa)

This feature has no annotations

sw_10_scaffold_3_8
Methanohalophilus mahii, Methanohalophilus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7158..8495
DNA (1338bp) protein (446aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase {ECO:0000313|EMBL:ADE35591.1}; EC=5.4.2.10 {ECO:0000313|EMBL:ADE35591.1};; TaxID=547558 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinacea
Phosphoglucosamine mutase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8T2_METMS
sw_10_scaffold_3_9
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8492..9712
DNA (1221bp) protein (407aa)
graD_2; sugar nucleotidyltransferase ( glucose-1-phosphate thymidylyltransferase ) 2 (EC:2.7.7.24)
Sugar nucleotidyltransferase n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0GWG1_9EURY
Sugar nucleotidyltransferase {ECO:0000313|EMBL:ELZ75857.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33
sw_10_scaffold_3_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9865..10161
DNA (297bp) protein (99aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
sw_10_scaffold_3_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10158..10598
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D425_9EURY
PIN domain
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
sw_10_scaffold_3_12
unknown

Not on your lists

10675..11010
DNA (336bp) protein (112aa)

This feature has no annotations

sw_10_scaffold_3_13
unknown

Not on your lists

11007..11540
DNA (534bp) protein (178aa)

This feature has no annotations

sw_10_scaffold_3_14
unknown

Not on your lists

11659..11841
DNA (183bp) protein (61aa)

This feature has no annotations

sw_10_scaffold_3_15

Not on your lists

comp(11968..12552)
DNA (585bp) protein (195aa)
Archaeal flagellin-like protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WTJ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AIF18885.1}; TaxID=1456524 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_84_G11.;"
hypothetical protein
sw_10_scaffold_3_16

Not on your lists

comp(12565..13080)
DNA (516bp) protein (172aa)
Archaeal flagellin N-terminal-like domain protein n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IA13_ACIB4
Uncharacterized protein {ECO:0000313|EMBL:AIF18885.1}; TaxID=1456524 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_84_G11.;"
hypothetical protein
sw_10_scaffold_3_17
Methanotorris formicicus, Methanotorris, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


13676..14113
DNA (438bp) protein (146aa)
30S ribosomal protein S15 n=1 Tax=Methanotorris formicicus Mc-S-70 RepID=H1KX61_9EURY
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=647171 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanotorris.;" source="Methanotorris
30S ribosomal protein S15
sw_10_scaffold_3_18
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

14136..15458
DNA (1323bp) protein (441aa)
putative single-stranded-DNA-specific exonuclease (EC:3.1.-.-)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000362F589
putative single-stranded-DNA-specific exonuclease Tax=RBG_13_Euryarchaeota_57_23_curated
sw_10_scaffold_3_19
unknown

Not on your lists

15451..15681
DNA (231bp) protein (77aa)

This feature has no annotations

sw_10_scaffold_3_20
unknown

Not on your lists

comp(15910..16251)
DNA (342bp) protein (114aa)

This feature has no annotations

sw_10_scaffold_3_21

Not on your lists

comp(16252..16506)
DNA (255bp) protein (85aa)
Marine sediment metagenome DNA, contig: S01H1_S19636 {ECO:0000313|EMBL:GAG21931.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
sw_10_scaffold_3_22
unknown

Not on your lists

comp(16592..16762)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_10_scaffold_3_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(17385..17885)
DNA (501bp) protein (167aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIT4_9EURY
putative nucleic acid-binding protein, contains PIN domain
Tax=RBG_16_Euryarchaeota_67_27_curated
sw_10_scaffold_3_24
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(17882..18178)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPZ9_ARCVS
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
sw_10_scaffold_3_25
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18847..22002)
DNA (3156bp) protein (1052aa)
UPI0003D1AA95 related cluster n=1 Tax=unknown RepID=UPI0003D1AA95
Uncharacterized protein {ECO:0000313|EMBL:KKG08550.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
sw_10_scaffold_3_26
unknown

Not on your lists

comp(23335..23625)
DNA (291bp) protein (97aa)

This feature has no annotations

sw_10_scaffold_3_27
unknown

Not on your lists

23952..24293
DNA (342bp) protein (114aa)

This feature has no annotations

sw_10_scaffold_3_28
unknown

Not on your lists

comp(24439..24762)
DNA (324bp) protein (108aa)

This feature has no annotations

sw_10_scaffold_3_29
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25016..28372)
DNA (3357bp) protein (1119aa)
Nitrous oxidase accessory protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I7R2_HALRX
nitrous oxidase accessory protein
Nitrous oxidase accessory protein {ECO:0000313|EMBL:AGB14803.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain D
sw_10_scaffold_3_30
Psychromonas ingrahamii, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28369..29646)
DNA (1278bp) protein (426aa)
PKD domain containing protein n=1 Tax=Psychromonas ingrahamii (strain 37) RepID=A1SSA2_PSYIN
PKD domain-containing protein
PKD domain containing protein {ECO:0000313|EMBL:ABM02367.1}; Flags: Precursor;; TaxID=357804 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;"
Displaying items 1-30 of 184 in total

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