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sw_10_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_30_1
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

comp(172..615)
DNA (444bp) protein (148aa)
Leucine-responsive regulatory protein n=1 Tax=Pyrococcus sp. ST04 RepID=I3RCP0_9EURY
Lrp/AsnC family transcriptional regulator Tax=RBG_13_Euryarchaeota_57_23_curated
leucine-responsive regulatory protein
sw_10_scaffold_30_2
unknown

Not on your lists

comp(780..1247)
DNA (468bp) protein (156aa)

This feature has no annotations

sw_10_scaffold_30_3

Not on your lists

1546..1872
DNA (327bp) protein (109aa)
Putative thioredoxin n=1 Tax=uncultured marine microorganism HF4000_ANIW137J11 RepID=B3T4Q4_9ZZZZ
Putative thioredoxin {ECO:0000313|EMBL:ABZ07563.1}; TaxID=455532 species="unclassified sequences; environmental samples.;" source="uncultured marine microorganism HF4000_ANIW137J11.;"
trx1; thioredoxin
sw_10_scaffold_30_4
unknown

Not on your lists

comp(1882..2784)
DNA (903bp) protein (301aa)

This feature has no annotations

sw_10_scaffold_30_5
RBG_13_Chloroflexi_46_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(2781..3449)
DNA (669bp) protein (223aa)
rpe; ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RBG_13_Chloroflexi_46_14_curated
Ribulose-phosphate 3-epimerase n=2 Tax=Geobacter metallireducens RepID=Q39ZK8_GEOMG
rpe; ribulose-phosphate 3-epimerase
sw_10_scaffold_30_6
unknown

Not on your lists

comp(3449..3655)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_10_scaffold_30_7
unknown

Not on your lists

comp(3871..4107)
DNA (237bp) protein (79aa)

This feature has no annotations

sw_10_scaffold_30_8
Thermoproteus uzoniensis, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

4303..4899
DNA (597bp) protein (199aa)
Transcriptional regulator, PadR-like family n=1 Tax=Thermoproteus uzoniensis (strain 768-20) RepID=F2L2A5_THEU7
PadR-like family transcriptional regulator
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:AEA11770.1}; TaxID=999630 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Therm
sw_10_scaffold_30_9
unknown

Not on your lists

comp(4903..5037)
DNA (135bp) protein (45aa)

This feature has no annotations

sw_10_scaffold_30_10
unknown

Not on your lists

5257..9228
DNA (3972bp) protein (1324aa)

This feature has no annotations

sw_10_scaffold_30_11
unknown

Not on your lists

comp(9232..9531)
DNA (300bp) protein (100aa)

This feature has no annotations

sw_10_scaffold_30_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

10006..10854
DNA (849bp) protein (283aa)
Putative transcriptional regulator n=1 Tax=Candidatus Nanosalinarum sp. J07AB56 RepID=G0QBY2_9EURY
TrmB family transcriptional regulator Tax=RBG_16_Euryarchaeota_68_12_curated
putative TrmB family transcriptional regulator
sw_10_scaffold_30_13
unknown

Not on your lists

10864..11079
DNA (216bp) protein (72aa)

This feature has no annotations

sw_10_scaffold_30_14
unknown

Not on your lists

11101..11961
DNA (861bp) protein (287aa)

This feature has no annotations

sw_10_scaffold_30_15
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

12214..13020
DNA (807bp) protein (269aa)
TrmB family transcriptional regulator Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein id=18316002 bin=Nanosalinarum tax=Nanosalinarum
TrmB family transcriptional regulator
sw_10_scaffold_30_16
unknown

Not on your lists

13153..14745
DNA (1593bp) protein (531aa)

This feature has no annotations

sw_10_scaffold_30_17
unknown

Not on your lists

14970..15572
DNA (603bp) protein (201aa)

This feature has no annotations

sw_10_scaffold_30_18
unknown

Not on your lists

15815..16564
DNA (750bp) protein (250aa)

This feature has no annotations

sw_10_scaffold_30_19
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16611..18374
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W080_UNCMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ38213.1}; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae
sw_10_scaffold_30_20
unknown

Not on your lists

18529..19626
DNA (1098bp) protein (366aa)

This feature has no annotations

sw_10_scaffold_30_21
unknown

Not on your lists

19629..20189
DNA (561bp) protein (187aa)

This feature has no annotations

sw_10_scaffold_30_22
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20189..22969
DNA (2781bp) protein (927aa)
Type II secretion system protein E n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YWJ5_9EURY
Type II secretion system protein E {ECO:0000313|EMBL:EHQ35797.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Metha
ATPase, type IV secretory pathway VirB11 component like protein
sw_10_scaffold_30_23
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

22971..23846
DNA (876bp) protein (292aa)
Archaeal flagella assembly protein J n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WL18_9EURY
type II secretion system protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_30_24
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

23851..26292
DNA (2442bp) protein (814aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000370CB47
Flp pilus assembly protein TadC
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_30_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26295..27788
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMG1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ23572.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_30_26

Not on your lists

27979..28551
DNA (573bp) protein (191aa)
UPF0290 protein C437_17792 n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IV13_HALVA
CDP-diglyceride synthetase {ECO:0000313|EMBL:AIF01988.1}; TaxID=1457895 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_152_H07.;"
hypothetical protein
sw_10_scaffold_30_27
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28548..29075
DNA (528bp) protein (176aa)
pyrE2; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
Orotate phosphoribosyltransferase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C7S6_9EURY
sw_10_scaffold_30_28
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

29123..30418
DNA (1296bp) protein (432aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003660370
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_30_29
unknown

Not on your lists

30495..30614
DNA (120bp) protein (40aa)

This feature has no annotations

sw_10_scaffold_30_30
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30844..31686
DNA (843bp) protein (281aa)
Universal stress protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HM20_9EURY
Universal stress protein {ECO:0000313|EMBL:ELZ84843.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-151
UspA domain protein
Displaying items 1-30 of 33 in total

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