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sw_10_scaffold_31

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_31_1
unknown

Not on your lists

2..73
DNA (72bp) protein (24aa)

This feature has no annotations

sw_10_scaffold_31_2
unknown

Not on your lists

348..908
DNA (561bp) protein (187aa)

This feature has no annotations

sw_10_scaffold_31_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1121..1510)
DNA (390bp) protein (130aa)
Protein secretion chaperonin CsaA n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YGI1_9EURY
Protein secretion chaperonin CsaA {ECO:0000313|EMBL:GAD53381.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-5
EMAP domain-containing protein
sw_10_scaffold_31_4
Planococcus antarcticus, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1593..2912)
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Planococcus antarcticus DSM 14505 RepID=I4X2N2_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIM05974.1}; TaxID=1185653 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus antarcticus DSM 14505.;"
sw_10_scaffold_31_5
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

3050..4462
DNA (1413bp) protein (471aa)
Conserved repeat domain protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T991_METSL
hypothetical protein
Conserved repeat domain protein {ECO:0000313|EMBL:ADZ09842.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Metha
sw_10_scaffold_31_6
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(4607..7882)
DNA (3276bp) protein (1092aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C4P3_SPHTD
hypothetical protein; K02004 putative ABC transport system permease protein Tax=RBG_16_Euryarchaeota_68_12_curated
hypothetical protein
sw_10_scaffold_31_7
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(7879..8574)
DNA (696bp) protein (232aa)
ABC transporter n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI0003811C8C
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACR79161.1}; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga olearia (strain TBF 19.5.1).;"
sw_10_scaffold_31_8
unknown

Not on your lists

comp(8634..8810)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_10_scaffold_31_9
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(8866..9546)
DNA (681bp) protein (227aa)
queC; queuosine biosynthesis protein queC (EC:3.5.-.-)
7-cyano-7-deazaguanine synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP6_9BACT
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_31_10
unknown

Not on your lists

9678..9962
DNA (285bp) protein (95aa)

This feature has no annotations

sw_10_scaffold_31_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10126..11277
DNA (1152bp) protein (384aa)
Cell division protein FtsZ n=1 Tax=Halogranum salarium B-1 RepID=J2ZIP6_9EURY
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_16_Euryarchaeota_41_19_curated
cell division protein FtsZ
sw_10_scaffold_31_12
Candidatus Methanomassiliicoccus intestinalis, Methanomassiliicoccus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

11464..11739
DNA (276bp) protein (92aa)
Protein translocase subunit SecE n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8P5_9EURY
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1295009 species="Archaea; Euryarchaeo
sw_10_scaffold_31_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


11741..12271
DNA (531bp) protein (177aa)
UPI0003D1B641 related cluster n=1 Tax=unknown RepID=UPI0003D1B641
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Me
nusG; transcription antitermination protein NusG
sw_10_scaffold_31_14
unknown

Not on your lists

12672..13028
DNA (357bp) protein (119aa)

This feature has no annotations

sw_10_scaffold_31_15
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


13173..13649
DNA (477bp) protein (159aa)
50S ribosomal protein L11 n=1 Tax=Methanocaldococcus villosus KIN24-T80 RepID=N6VYZ3_9EURY
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
rpl11p; 50S ribosomal protein L11P
sw_10_scaffold_31_16
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(13772..14653)
DNA (882bp) protein (294aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9Y2_9ARCH
putative transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
transcriptional regulator TrmB
sw_10_scaffold_31_17
unknown

Not on your lists

14884..15213
DNA (330bp) protein (110aa)

This feature has no annotations

sw_10_scaffold_31_18
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15214..15750)
DNA (537bp) protein (179aa)
Probable ribosome biogenesis protein C457_16952 n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G0X0_9EURY
Probable ribosome biogenesis protein C457_16952 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halo
hypothetical protein
sw_10_scaffold_31_19
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15824..16741)
DNA (918bp) protein (306aa)
tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase {ECO:0000256|HAMAP-Rule:MF_01922}; EC=2.5.1.114 {ECO:0000256|HAMAP-Rule:MF_01922};; tRNA wyosine derivatives biosynthesis protein T
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WEL5_9EURY
hypothetical protein
sw_10_scaffold_31_20
unknown

Not on your lists

16866..18515
DNA (1650bp) protein (550aa)

This feature has no annotations

sw_10_scaffold_31_21
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(18518..19741)
DNA (1224bp) protein (408aa)
FAD dependent oxidoreductase, putative n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9Q2_ACIB4
geranylgeranyl reductase Tax=RBG_16_Euryarchaeota_68_13_curated
geranylgeranyl reductase
sw_10_scaffold_31_22
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

19995..20552
DNA (558bp) protein (186aa)
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_31_23
Cellulophaga baltica, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(20553..23684)
DNA (3132bp) protein (1044aa)
PKD domain containing protein n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XAP9_CELAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ42816.1}; TaxID=1348584 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga baltica
sw_10_scaffold_31_24
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23870..24502)
DNA (633bp) protein (211aa)
baaA1; trimeric autotransporter adhesin
Putative trimeric autotransporter adhesin {ECO:0000313|EMBL:CBY80800.1}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Ha
sw_10_scaffold_31_25
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24639..24992
DNA (354bp) protein (118aa)
pth2; aminoacyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase, archaeal type n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YTI2_9EURY
Peptidyl-tRNA hydrolase, archaeal type {ECO:0000313|EMBL:GAD52062.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
sw_10_scaffold_31_26
unknown

Not on your lists

25059..25646
DNA (588bp) protein (196aa)

This feature has no annotations

sw_10_scaffold_31_27
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

25722..26810
DNA (1089bp) protein (363aa)
CarA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=CARA_METKA
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_31_28
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

26811..30095
DNA (3285bp) protein (1095aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003819C5D
Carbamoyl-phosphate synthase large chain
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_31_29
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30082..30972
DNA (891bp) protein (297aa)
Hydrolase, alpha/beta fold family, putative n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE39_ACIB4
alpha/beta hydrolase fold protein
Hydrolase or acyltransferase, alpha/beta fold family {ECO:0000313|EMBL:ACH37372.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;
sw_10_scaffold_31_30
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

31117..31869
DNA (753bp) protein (251aa)
serB1; putative phosphoserine phosphatase (EC:3.1.3.3) Tax=RBG_16_Actinobacteria_64_13_curated
HAD-superfamily subfamily IB, PSPase-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AU72_RUBXD
HAD family hydrolase
Displaying items 1-30 of 35 in total

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