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sw_10_scaffold_415

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_415_1
unknown

Not on your lists

2..94
DNA (93bp) protein (31aa)

This feature has no annotations

sw_10_scaffold_415_2
Ostreococcus tauri, Ostreococcus, Mamiellales, Mamiellophyceae, Chlorophyta, Viridiplantae

Not on your lists

167..1441
DNA (1275bp) protein (425aa)
Quinoprotein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00SF0_OSTTA
Bacterial surface protein 26-residue repeat {ECO:0000313|EMBL:CEF99750.1}; TaxID=70448 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostr
hypothetical protein
sw_10_scaffold_415_3
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(1489..2613)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003623685
signal recognition particle protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_415_4
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2610..3071)
DNA (462bp) protein (154aa)
Prefoldin subunit alpha n=1 Tax=Natronococcus occultus SP4 RepID=L0JSK8_9EURY
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
prefoldin subunit alpha
sw_10_scaffold_415_5
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3074..3307)
DNA (234bp) protein (78aa)
50S ribosomal protein L18Ae n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PUA7_METTM
rplX; 50S ribosomal protein LX
50S ribosomal protein L18Ae {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein L20e {ECO:0000256|HAMAP-Rule:MF_00273}; 50S ribosomal protein LX {ECO:0000256|HAMAP-Rule:MF_00273}; TaxID=79929 spe
Bact and Arch Kari Finstad (2/5/15)
sw_10_scaffold_415_6
unknown

Not on your lists

3470..4657
DNA (1188bp) protein (396aa)

This feature has no annotations

sw_10_scaffold_415_7
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

4890..5255
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HKA2_ACIS0
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_415_8
unknown

Not on your lists

comp(5252..5629)
DNA (378bp) protein (126aa)

This feature has no annotations

sw_10_scaffold_415_9
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5617..8013)
DNA (2397bp) protein (799aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanoce
DNA polymerase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YY53_METPS
pol; family B DNA polymerase
sw_10_scaffold_415_10
unknown

Not on your lists

comp(8070..8654)
DNA (585bp) protein (195aa)

This feature has no annotations

sw_10_scaffold_415_11
unknown

Not on your lists

comp(8738..9082)
DNA (345bp) protein (115aa)

This feature has no annotations

sw_10_scaffold_415_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9082..10497)
DNA (1416bp) protein (472aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWU9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50036.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_415_13
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10640..11170
DNA (531bp) protein (177aa)
Digeranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01286}; Short=DGGGP synthase {ECO:0000256|HAMAP-Rule:MF_01286};; Short=DGGGPS {ECO:0000256|HAMAP-Rule:MF_01286};; EC=2.5.1.42 {EC
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037B9578
UbiA; 4-hydroxybenzoate polyprenyltransferase
sw_10_scaffold_415_14
unknown

Not on your lists

11155..11367
DNA (213bp) protein (71aa)

This feature has no annotations

sw_10_scaffold_415_15
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

11364..12107
DNA (744bp) protein (248aa)
geranylgeranylglyceryl phosphate synthase (EC:2.5.1.41)
Geranylgeranylglyceryl phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00112}; Short=GGGP synthase {ECO:0000256|HAMAP-Rule:MF_00112};; Short=GGGPS {ECO:0000256|HAMAP-Rule:MF_00112};; EC=2.5.1.41 {ECO:00
Geranylgeranylglyceryl phosphate synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9F2_ACIB4
sw_10_scaffold_415_16
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

12190..12459
DNA (270bp) protein (90aa)
Looped-hinge helix DNA binding protein domain protein, AbrB family {ECO:0000313|EMBL:AIG96905.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archae
AbrB family transcriptional regulator
sw_10_scaffold_415_17
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

12462..12878
DNA (417bp) protein (139aa)
PilT protein-like protein n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FM03_METHJ
twitching motility protein PilT Tax=RBG_16_Micrarchaeota_49_10_curated
twitching motility protein PilT
sw_10_scaffold_415_18
unknown

Not on your lists

12984..14438
DNA (1455bp) protein (485aa)

This feature has no annotations

sw_10_scaffold_415_19
unknown

Not on your lists

comp(14469..14717)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_10_scaffold_415_20

Not on your lists

comp(14720..15502)
DNA (783bp) protein (261aa)
Enoyl-CoA hydratase/isomerase (Crt) {ECO:0000313|EMBL:AIE93899.1}; EC=4.2.1.55 {ECO:0000313|EMBL:AIE93899.1};; TaxID=1455916 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultur
Enoyl-CoA hydratase/carnithine racemase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IKN4_THETR
enoyl-CoA hydratase/carnithine racemase
sw_10_scaffold_415_21

Not on your lists

comp(15523..16497)
DNA (975bp) protein (325aa)
3-hydroxyacyl-CoA dehydrogenase (PaaH, hbd, fadB, mmgB) {ECO:0000313|EMBL:AIF08029.1}; EC=1.1.1.157 {ECO:0000313|EMBL:AIF08029.1};; TaxID=1456108 species="Archaea; Thaumarchaeota; environmental sample
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon Gpl RepID=T0N4H4_9EURY
beta-hydroxybutyryl-CoA dehydrogenase
sw_10_scaffold_415_22
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(17017..17235)
DNA (219bp) protein (73aa)
amidinotransferase n=1 Tax=Salisaeta longa RepID=UPI0003B40CFD
amidinotransferase
Amidinotransferase {ECO:0000313|EMBL:ACY48686.1}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (
sw_10_scaffold_415_23
unknown

Not on your lists

comp(17356..17517)
DNA (162bp) protein (54aa)

This feature has no annotations

sw_10_scaffold_415_24
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17599..17955)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI00035EE327
amidinotransferase
Amidinotransferase {ECO:0000313|EMBL:ACU40458.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888
sw_10_scaffold_415_25
unknown

Not on your lists

comp(18007..18423)
DNA (417bp) protein (139aa)

This feature has no annotations

sw_10_scaffold_415_26
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18491..19165)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PYN0_METTM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL59328.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanother
sw_10_scaffold_415_27
Pyrococcus sp. NA2, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(19170..20120)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HM51_PYRSN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC51705.1}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA2).;"
sw_10_scaffold_415_28
Peptococcaceae bacterium BRH_c4b, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20120..20515)
DNA (396bp) protein (132aa)
cobalamin B12-binding domain-containing protein; K01849 methylmalonyl-CoA mutase, C-terminal domain [EC:5.4.99.2] id=14430911 bin=bin3_NC10 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KJS14866.1}; TaxID=1629717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4b.;"
methylmalonyl-CoA mutase family protein
sw_10_scaffold_415_29
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

20699..22045
DNA (1347bp) protein (449aa)
anthranilate synthase component I (EC:4.1.3.27)
Anthranilate synthase component I n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVE4_9BACT
Anthranilate synthase component I {ECO:0000313|EMBL:BAL59573.1}; TaxID=1446466 species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
sw_10_scaffold_415_30
Nitrososphaera viennensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

22042..22635
DNA (594bp) protein (198aa)
trpG; anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II {ECO:0000313|EMBL:AIC14738.1}; EC=4.1.3.27 {ECO:0000313|EMBL:AIC14738.1};; TaxID=926571 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitroso
Anthranilate synthase component II n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IN19_NITGG
Displaying items 1-30 of 48 in total

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