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sw_10_scaffold_43

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_43_1
unknown

Not on your lists

comp(1..171)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_10_scaffold_43_2
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(463..3273)
DNA (2811bp) protein (937aa)
Aconitate hydratase {ECO:0000313|EMBL:EMA65375.1}; EC=4.2.1.3 {ECO:0000313|EMBL:EMA65375.1};; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
acnA; aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0P971_9EURY
sw_10_scaffold_43_3
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3370..4734)
DNA (1365bp) protein (455aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNQ766 RepID=UPI000361AB39
carboxypeptidase
Putative carboxypeptidase {ECO:0000313|EMBL:EJJ08696.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
sw_10_scaffold_43_4
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5381..6601
DNA (1221bp) protein (407aa)
Pyrrolo-quinoline quinone n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BWC2_9EURY
WD40-like repeat protein
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ELZ14402.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans
sw_10_scaffold_43_5

Not on your lists

comp(6783..7211)
DNA (429bp) protein (143aa)
Nucleotide-binding protein, PIN domain-containing protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B5K3_9EURY
Marine sediment metagenome DNA, contig: S03H2_L00353 {ECO:0000313|EMBL:GAH36066.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA-binding protein
sw_10_scaffold_43_6
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7212..7433)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NAM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG93860.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_10_scaffold_43_7
RBG_16_Planctomycetes_64_12_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(7488..7988)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI00037EAD67
hypothetical protein Tax=RBG_16_Planctomycetes_64_12_curated
hypothetical protein
sw_10_scaffold_43_8
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8120..9127
DNA (1008bp) protein (336aa)
SEC-C motif domain protein {ECO:0000313|EMBL:EHQ36295.1}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoplanus.;" source="Methanoplanus
SEC-C motif domain protein
sw_10_scaffold_43_trna_1
unknown

Not on your lists

comp(9989..10063)
DNA (75bp)
transferRNA
sw_10_scaffold_43_9
unknown

Not on your lists

10582..10773
DNA (192bp) protein (64aa)

This feature has no annotations

sw_10_scaffold_43_10
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10888..11160)
DNA (273bp) protein (91aa)
Putative RNA-binding protein containing KH domain, possibly ribosomal protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9U9_METCZ
RNA-binding protein containing KH domain, possibly ribosomal protein
Putative RNA-binding protein containing KH domain, possibly ribosomal protein {ECO:0000313|EMBL:AFD00909.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocel
sw_10_scaffold_43_11
unknown

Not on your lists

11264..11800
DNA (537bp) protein (179aa)

This feature has no annotations

sw_10_scaffold_43_12
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11797..13167
DNA (1371bp) protein (457aa)
Phospholipase D/transphosphatidylase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E0X2_9EURY
Phospholipase D/transphosphatidylase {ECO:0000313|EMBL:ELZ41421.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sacchar
pld; phospholipase D
sw_10_scaffold_43_13
unknown

Not on your lists

comp(13118..13633)
DNA (516bp) protein (172aa)

This feature has no annotations

sw_10_scaffold_43_14
RBG_13_Euryarchaeota_57_23_curated, Euryarchaeota, Archaea

Not on your lists

comp(14193..15992)
DNA (1800bp) protein (600aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003767ADA
putative ATPase, Rnase L inhibitor (RLI) like protein Tax=RBG_13_Euryarchaeota_57_23_curated
putative ATPase RIL
sw_10_scaffold_43_15
unknown

Not on your lists

16156..17436
DNA (1281bp) protein (427aa)

This feature has no annotations

sw_10_scaffold_43_16
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

17461..18519
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W3R5_9EURY
hypothetical protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_43_17
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18812..19231
DNA (420bp) protein (140aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LQ52_9PROT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EKF07007.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" sourc
short-chain dehydrogenase/reductase SDR
sw_10_scaffold_43_18
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

Not on your lists

19247..19660
DNA (414bp) protein (138aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5D3_9ARCH
3-oxoacyl-[acyl-carrier protein] reductase
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:BAJ47502.1}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Cal
sw_10_scaffold_43_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

19660..20466
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon I-plasma RepID=T0LP14_9EURY
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
sw_10_scaffold_43_20
unknown

Not on your lists

20553..20750
DNA (198bp) protein (66aa)

This feature has no annotations

sw_10_scaffold_43_21
unknown

Not on your lists

20761..22377
DNA (1617bp) protein (539aa)

This feature has no annotations

sw_10_scaffold_43_22

Not on your lists

comp(22551..24335)
DNA (1785bp) protein (595aa)
X-prolyl-dipeptidyl aminopeptidase (PepXP) {ECO:0000313|EMBL:AIF06831.1}; EC=3.4.14.11 {ECO:0000313|EMBL:AIF06831.1};; TaxID=1457971 species="Archaea; Euryarchaeota; environmental samples.;" source="u
Putative X-Pro dipeptidyl-peptidase (S15 family) n=1 Tax=uncultured marine microorganism HF4000_ANIW137J11 RepID=B3T4P8_9ZZZZ
hydrolase CocE/NonD family protein
sw_10_scaffold_43_23
Candidatus Nitrososphaera gargensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

Not on your lists

24371..25339
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003666DBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFU57677.1}; TaxID=1237085 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Nitrososphaera
sw_10_scaffold_43_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25900..27711)
DNA (1812bp) protein (604aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0F7_HALMD
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACV48949.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="H
sw_10_scaffold_43_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27974..29905)
DNA (1932bp) protein (644aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036BA121
peptidase S8/S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:ACV48949.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="H
sw_10_scaffold_43_26
unknown

Not on your lists

comp(30195..31280)
DNA (1086bp) protein (362aa)

This feature has no annotations

sw_10_scaffold_43_27
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31429..32547
DNA (1119bp) protein (373aa)
Acyl-CoA dehydrogenase domain protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LYC8_HALO1
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AJC17792.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
sw_10_scaffold_43_28
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32836..47529
DNA (14694bp) protein (4898aa)
Peptidase, m36 (Fungalysin) family protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FYR0_9EURY
Peptidase, m36 (Fungalysin) family protein {ECO:0000313|EMBL:ELZ65080.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax pra
PKD domain-containing protein
Displaying 29 items

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