ggKbase home page

sw_10_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 64 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_45_1
unknown

Not on your lists

617..2197
DNA (1581bp) protein (527aa)

This feature has no annotations

sw_10_scaffold_45_2
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(2529..4316)
DNA (1788bp) protein (596aa)
Putative X-Pro dipeptidyl-peptidase (S15 family) n=1 Tax=uncultured marine microorganism HF4000_ANIW137J11 RepID=B3T4P8_9ZZZZ
x-prolyl-dipeptidyl aminopeptidase
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_45_3
unknown

Not on your lists

comp(4403..4543)
DNA (141bp) protein (47aa)

This feature has no annotations

sw_10_scaffold_45_4
Synechococcus sp. JA-2-3B'a(2-13), Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4683..5471
DNA (789bp) protein (263aa)
BioY family protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JML1_SYNJB
BioY family protein
BioY family protein {ECO:0000313|EMBL:ABD02026.1}; TaxID=321332 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain JA-2-3B'a(2-1
sw_10_scaffold_45_5
unknown

Not on your lists

5708..5935
DNA (228bp) protein (76aa)

This feature has no annotations

sw_10_scaffold_45_6
Methanoculleus sp. MH98A, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5940..6530)
DNA (591bp) protein (197aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TTD3_METAC
TrmB family transcriptional regulator {ECO:0000313|EMBL:KDE55071.1}; TaxID=1495314 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="
transcriptional regulator, ArsR family
sw_10_scaffold_45_7
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6745..7734)
DNA (990bp) protein (330aa)
ABC transporter ATP-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3U3_9EURY
drrA: daunorubicin resistance ABC transporter, ATP-binding protein
DrrA: daunorubicin resistance ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AHY46047.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubro
sw_10_scaffold_45_8
unknown

Not on your lists

comp(7728..9053)
DNA (1326bp) protein (442aa)

This feature has no annotations

sw_10_scaffold_45_9
unknown

Not on your lists

comp(9047..10396)
DNA (1350bp) protein (450aa)

This feature has no annotations

sw_10_scaffold_45_10
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

10968..11684
DNA (717bp) protein (239aa)
Transposase, IS240 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMI1_ARCVS
transposase, IS240
Transposase, IS240 {ECO:0000313|EMBL:AEA47178.1}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus veneficus (strai
sw_10_scaffold_45_11
unknown

Not on your lists

12426..13151
DNA (726bp) protein (242aa)

This feature has no annotations

sw_10_scaffold_45_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13081..14778)
DNA (1698bp) protein (566aa)
hypothetical protein n=1 Tax=Rudanella lutea RepID=UPI00037CAB41
hypothetical protein
PKD domain-containing protein {ECO:0000313|EMBL:ELZ29639.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbade
sw_10_scaffold_45_13
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14910..16862
DNA (1953bp) protein (651aa)
DNA/RNA helicase, superfamily II, SNF2 family n=1 Tax=Rhodanobacter denitrificans RepID=M4NMB9_9GAMM
DNA/RNA helicase, superfamily II, SNF2 family
DNA/RNA helicase, superfamily II, SNF2 family {ECO:0000313|EMBL:AGG90798.1}; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" so
sw_10_scaffold_45_14
unknown

Not on your lists

16900..17013
DNA (114bp) protein (38aa)

This feature has no annotations

sw_10_scaffold_45_15
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17192..17863
DNA (672bp) protein (224aa)
ABC-type polar amino acid transport system, ATPase component n=1 Tax=Natronococcus occultus SP4 RepID=L0JYL2_9EURY
ABC-type polar amino acid transport system, ATPase component
ABC-type polar amino acid transport system, ATPase component {ECO:0000313|EMBL:AGB37826.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" so
sw_10_scaffold_45_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17863..18651
DNA (789bp) protein (263aa)
Putative ABC transport system permease protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTD5_9EURY
Putative ABC transport system permease protein {ECO:0000313|EMBL:EFW91864.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Hal
hypothetical protein
sw_10_scaffold_45_17
unknown

Not on your lists

comp(18696..19580)
DNA (885bp) protein (295aa)

This feature has no annotations

sw_10_scaffold_45_18
unknown

Not on your lists

comp(19646..20335)
DNA (690bp) protein (230aa)

This feature has no annotations

sw_10_scaffold_45_19
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20473..21159
DNA (687bp) protein (229aa)
Beta-lactamase domain protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D4E1_HALXS
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AEH38682.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
sw_10_scaffold_45_20
unknown

Not on your lists

21184..21696
DNA (513bp) protein (171aa)

This feature has no annotations

sw_10_scaffold_45_21
Bacteroides salanitronis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21759..22148)
DNA (390bp) protein (130aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003080824
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY35148.1}; TaxID=667015 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salanitronis (strai
sw_10_scaffold_45_22
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

22335..24152
DNA (1818bp) protein (606aa)
archaeosine tRNA-ribosyltransferase type 2 (EC:2.4.2.-)
tRNA-guanine transglycosylase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5Z5_9EURY
archaeosine tRNA-ribosyltransferase type 2 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
sw_10_scaffold_45_23
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

24395..25501
DNA (1107bp) protein (369aa)
TIGR01210 family protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TAN7_9EURY
TIGR01210 family protein {ECO:0000313|EMBL:EMR73722.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
nitrogen fixation protein NifB
sw_10_scaffold_45_24
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25503..26711)
DNA (1209bp) protein (403aa)
thermitase (EC:3.4.21.66)
Thermitase {ECO:0000313|EMBL:CCJ37062.1}; EC=3.4.21.66 {ECO:0000313|EMBL:CCJ37062.1};; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoc
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7LKK4_METBM
sw_10_scaffold_45_25
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26749..28428)
DNA (1680bp) protein (560aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halobacterium sp. DL1 RepID=G4IEE0_9EURY
Histidine kinase {ECO:0000313|EMBL:AHG04785.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
multi-sensor signal transduction histidine kinase
sw_10_scaffold_45_26
unknown

Not on your lists

comp(28481..29461)
DNA (981bp) protein (327aa)

This feature has no annotations

sw_10_scaffold_45_27
CG_CPR12_01, CG_CPR12, Bacteria

Not on your lists

comp(29639..30076)
DNA (438bp) protein (146aa)
ribonuclease H; K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_CPR12_01
Ribonuclease HI n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K925_HALHC
ribonuclease HI
sw_10_scaffold_45_28

Not on your lists

30149..31192
DNA (1044bp) protein (348aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9K4_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38784.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
nucleic acid-binding protein
sw_10_scaffold_45_29
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31210..32112
DNA (903bp) protein (301aa)
Dihydrolipoamide acyltransferase n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TQR7_9DELT
2-oxo acid dehydrogenase acyltransferase catalytic subunit Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
2-oxo acid dehydrogenase acyltransferase catalytic subunit
sw_10_scaffold_45_30
unknown

Not on your lists

32349..32726
DNA (378bp) protein (126aa)

This feature has no annotations

Displaying items 1-30 of 64 in total

View Taxonomy