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sw_10_scaffold_6

Search features with annotation key words

Displaying items 1-30 of 98 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_6_1
unknown

Not on your lists

comp(850..1461)
DNA (612bp) protein (204aa)

This feature has no annotations

sw_10_scaffold_6_2
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1510..2454)
DNA (945bp) protein (315aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B852_METTP
thiamine-monophosphate kinase
sw_10_scaffold_6_3
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2457..2654)
DNA (198bp) protein (66aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B572_METTP
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABK13846.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;"
sw_10_scaffold_6_4
unknown

Not on your lists

comp(2699..3721)
DNA (1023bp) protein (341aa)

This feature has no annotations

sw_10_scaffold_6_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3726..4529
DNA (804bp) protein (268aa)
lplA; lipoate-protein ligase (EC:2.7.7.63)
Lipoate-protein ligase A n=1 Tax=halophilic archaeon J07HB67 RepID=U1R3R9_9EURY
Lipoate-protein ligase A {ECO:0000313|EMBL:ERH13052.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
sw_10_scaffold_6_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4842..5468)
DNA (627bp) protein (209aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1227456 species=
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYU1_9EURY
sw_10_scaffold_6_7
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists

5641..5988
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036E012F
hypothetical protein Tax=RBG_13_Euryarchaeota_61_15_curated
hypothetical protein
sw_10_scaffold_6_8
Clostridium sp. CAG:273, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6173..8371)
DNA (2199bp) protein (733aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=1262789 species="Bacteria; Firmicute
DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 n=1 Tax=Clostridium sp. CAG:273 RepID=R7L6E7_9CLOT
sw_10_scaffold_6_9

Not on your lists

comp(8372..8557)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK54478.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sw_10_scaffold_6_10
unknown

Not on your lists

comp(8608..8826)
DNA (219bp) protein (73aa)

This feature has no annotations

sw_10_scaffold_6_11
unknown

Not on your lists

comp(8867..9112)
DNA (246bp) protein (82aa)

This feature has no annotations

sw_10_scaffold_6_12
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

comp(9122..9688)
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036BE102
hypothetical protein Tax=RBG_16_Euryarchaeota_62_10_curated
hypothetical protein
sw_10_scaffold_6_13
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10196..11134
DNA (939bp) protein (313aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NK23_ROSCS
Cell division inhibitor protein {ECO:0000313|EMBL:AKE51796.1}; TaxID=914150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella
hypothetical protein
sw_10_scaffold_6_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11418..11624
DNA (207bp) protein (69aa)
Cyclase/dehydrase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H8H2_ANADF
cyclase/dehydrase
Cyclase/dehydrase {ECO:0000313|EMBL:ABS25018.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source=
sw_10_scaffold_6_15
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

11740..12615
DNA (876bp) protein (292aa)
MerR family transcriptional regulator n=1 Tax=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) RepID=D3PM42_MEIRD
MerR family transcriptional regulator
MerR family transcriptional regulator {ECO:0000313|EMBL:AGK03606.1}; TaxID=504728 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (s
sw_10_scaffold_6_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12799..13668
DNA (870bp) protein (290aa)
Phytoene synthase {ECO:0000313|EMBL:ERH08693.1}; EC=2.5.1.32 {ECO:0000313|EMBL:ERH08693.1};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon
phytoene synthase (EC:2.5.1.32)
Phytoene synthase n=1 Tax=halophilic archaeon J07HX64 RepID=U1QNP8_9EURY
sw_10_scaffold_6_17

Not on your lists

comp(13662..14492)
DNA (831bp) protein (277aa)
Carotene biosynthesis associated membrane protein n=1 Tax=halophilic archaeon DL31 RepID=G2MLX3_9ARCH
carotene biosynthesis associated membrane protein
Carotene biosynthesis associated membrane protein {ECO:0000313|EMBL:AEN05800.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_10_scaffold_6_18
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14483..15325)
DNA (843bp) protein (281aa)
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase n=1 Tax=Natronococcus occultus SP4 RepID=L0K0Q7_9EURY
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase
4-hydroxybenzoate polyprenyltransferase-like prenyltransferase {ECO:0000313|EMBL:AGB37708.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;"
sw_10_scaffold_6_19
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15322..16800)
DNA (1479bp) protein (493aa)
Phytoene desaturase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LAZ6_9EURY
Phytoene desaturase {ECO:0000313|EMBL:EMA29120.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
phytoene desaturase
sw_10_scaffold_6_20
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17056..18084
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HCM6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EJY55229.1}; TaxID=1200346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum UR
membrane protein
sw_10_scaffold_6_21
unknown

Not on your lists

18184..18396
DNA (213bp) protein (71aa)

This feature has no annotations

sw_10_scaffold_6_trna_1
unknown

Not on your lists

19003..19074
DNA (72bp)
transferRNA
sw_10_scaffold_6_trna_2
unknown

Not on your lists

19563..19635
DNA (73bp)
transferRNA
sw_10_scaffold_6_22
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20324..20761)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IYD8_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA01877.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_10_scaffold_6_23
unknown

Not on your lists

20826..21698
DNA (873bp) protein (291aa)

This feature has no annotations

sw_10_scaffold_6_24
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

21869..23800
DNA (1932bp) protein (644aa)
Type 2 DNA topoisomerase 6 subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00322};; Type II DNA topoisomerase VI subunit B {ECO:0000256|HAMAP-Rule:MF_00322}; TaxID=
DNA topoisomerase VI, B subunit (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IC28_ACIB4
sw_10_scaffold_6_25
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

23800..24912
DNA (1113bp) protein (371aa)
DNA topoisomerase (ATP-hydrolyzing) (EC:5.99.1.3)
Type 2 DNA topoisomerase 6 subunit A n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U6N7_9EURY
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_6_26
unknown

Not on your lists

25047..25442
DNA (396bp) protein (132aa)

This feature has no annotations

sw_10_scaffold_6_27
unknown

Not on your lists

25552..25905
DNA (354bp) protein (118aa)

This feature has no annotations

sw_10_scaffold_6_28
SAR86 cluster bacterium SAR86B, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25959..27371
DNA (1413bp) protein (471aa)
Putative secreted protein n=1 Tax=SAR86 cluster bacterium SAR86B RepID=J4KT86_9GAMM
Putative secreted protein {ECO:0000313|EMBL:EJP74019.1}; TaxID=1123867 species="Bacteria; Proteobacteria; Gammaproteobacteria; SAR86 cluster.;" source="SAR86 cluster bacterium SAR86B.;"
Displaying items 1-30 of 98 in total

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