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sw_10_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_67_1
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(632..1531)
DNA (900bp) protein (300aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01975, ECO:0000256|RuleBase:RU003653}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01975};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01975};; EC=3.4.11.18 {
methionine aminopeptidase n=1 Tax=Halomicrobium katesii RepID=UPI00035C4ED6
sw_10_scaffold_67_2
Corynebacterium lipophiloflavum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1521..2117)
DNA (597bp) protein (199aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Corynebacterium lipophiloflavum DSM 44291 RepID=C0XPD7_9CORY
hypothetical protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:EEI17871.1}; TaxID=525263 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium lipo
sw_10_scaffold_67_3
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2363..2899)
DNA (537bp) protein (179aa)
Transcriptional regulator, XRE family n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SYS9_NATMM
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ADD04190.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (st
sw_10_scaffold_67_4
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

3050..4285
DNA (1236bp) protein (412aa)
Proteasome-activating nucleotidase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BEQ2_9EURY
Proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_10_scaffold_67_5
unknown

Not on your lists

4359..5252
DNA (894bp) protein (298aa)

This feature has no annotations

sw_10_scaffold_67_6
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(5257..6279)
DNA (1023bp) protein (341aa)
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4); K01974 RNA 3'-terminal phosphate cyclase [EC:6.5.1.4] Tax=RBG_13_Euryarchaeota_31_8_curated
tpc; RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00035D67FD
sw_10_scaffold_67_7
uncultured verrucomicrobium HF0500_27H16, Verrucomicrobia, Bacteria

Not on your lists

comp(6328..6873)
DNA (546bp) protein (182aa)
NTP pyrophosphohydrolases including oxidative damage repair enzymes n=1 Tax=uncultured verrucomicrobium HF0500_27H16 RepID=E7C5L5_9BACT
NTP pyrophosphohydrolases including oxidative damage repair enzymes {ECO:0000313|EMBL:ADI22739.1}; TaxID=723600 species="Bacteria; Verrucomicrobia; environmental samples.;" source="uncultured verrucom
NUDIX hydrolase
sw_10_scaffold_67_8
unknown

Not on your lists

comp(7085..7177)
DNA (93bp) protein (31aa)

This feature has no annotations

sw_10_scaffold_67_9
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7336..8916)
DNA (1581bp) protein (527aa)
FAD dependent oxidoreductase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9L6_SPHTD
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ACZ40509.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;"
sw_10_scaffold_67_10
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9152..10000)
DNA (849bp) protein (283aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35 1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CGE7_9EURY
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ELZ21432.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola
sw_10_scaffold_67_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10078..10671
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU26_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92105.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_10_scaffold_67_12
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10722..12353)
DNA (1632bp) protein (544aa)
acetolactate synthase n=1 Tax=Streptomyces viridosporus RepID=UPI0002DCC886
Uncharacterized protein {ECO:0000313|EMBL:KIE52589.1}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
thiamine pyrophosphate protein central region
sw_10_scaffold_67_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12402..15659)
DNA (3258bp) protein (1086aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DE19_HALXS
PAS/PAC sensor signal transduction histidine kinase rbh
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEH39250.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopig
sw_10_scaffold_67_14
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

15825..16658
DNA (834bp) protein (278aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55)
Enoyl-CoA hydratase n=1 Tax=uncultured bacterium A1Q1_fos_2037 RepID=L7W1I7_9BACT
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:CDM66965.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
sw_10_scaffold_67_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16861..18351)
DNA (1491bp) protein (497aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEZ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58809.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_10_scaffold_67_16
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18464..19243
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KHQ5_9EURY
enoyl-CoA hydratase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EMA20423.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae
sw_10_scaffold_67_17
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19316..22000
DNA (2685bp) protein (895aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=445975 species="Bacteria; Actinobacteria; Cori
Ribonuclease R n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9G5_9ACTN
ribonuclease R
sw_10_scaffold_67_18
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(22001..22432)
DNA (432bp) protein (144aa)
bacterioferritin n=1 Tax=Thermus islandicus RepID=UPI0003B52281
ferritin Dps family protein
Bacterioferritin {ECO:0000313|EMBL:BAD71305.1}; TaxID=300852 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus thermophilus (strain HB8 / ATCC 27634
sw_10_scaffold_67_19
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22533..23873)
DNA (1341bp) protein (447aa)
Beta-lactamase domain protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CW90_METMJ
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABN57640.1}; Flags: Precursor;; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;
sw_10_scaffold_67_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

23988..24833
DNA (846bp) protein (282aa)
ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Ribonuclease Z n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5U1_9EURY
Ribonuclease Z
sw_10_scaffold_67_21
unknown

Not on your lists

24901..25872
DNA (972bp) protein (324aa)

This feature has no annotations

sw_10_scaffold_67_22
Spirochaeta africana, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(25896..26780)
DNA (885bp) protein (295aa)
Putative esterase of the alpha-beta hydrolase superfamily n=1 Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UL32_SPIAZ
putative esterase of the alpha-beta hydrolase superfamily
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:AFG38225.1}; TaxID=889378 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochae
sw_10_scaffold_67_23
unknown

Not on your lists

26899..28470
DNA (1572bp) protein (524aa)

This feature has no annotations

sw_10_scaffold_67_24
CG_Micra_04, Micraarchaeota, Archaea

Not on your lists

comp(28677..29978)
DNA (1302bp) protein (434aa)
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22); K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=CG_Micra_04
asnC; asparaginyl-tRNA synthetase (EC:6.1.1.22)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037EE361
sw_10_scaffold_67_25
unknown

Not on your lists

30546..31049
DNA (504bp) protein (168aa)

This feature has no annotations

sw_10_scaffold_67_26
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(31056..32384)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZZD1_9ACTN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN01609.1}; TaxID=1313172 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter cocc
sw_10_scaffold_67_27
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

32479..33474
DNA (996bp) protein (332aa)
mevalonate kinase (EC:2.7.1.36)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=43
Mevalonate kinase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICQ0_ACIB4
sw_10_scaffold_67_28
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

33505..34311
DNA (807bp) protein (269aa)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=1198116 species="Archaea; Euryarchaeota; T
Isopentenyl phosphate kinase n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBH6_9EURY
putative archaeal kinase
sw_10_scaffold_67_29
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

34308..35423
DNA (1116bp) protein (372aa)
isopentenyl pyrophosphate isomerase (EC:5.3.3.2); K01823 isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2] Tax=RBG_16_Euryarchaeota_67_27_curated
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC:5.3.3.2)
Isopentenyl-diphosphate delta-isomerase, FMN-dependent n=2 Tax=mine drainage metagenome RepID=T1BSF2_9ZZZZ
sw_10_scaffold_67_30
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


35519..35962
DNA (444bp) protein (148aa)
30S ribosomal protein S6e n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TA77_9EURY
ribosomal protein S6E (S10) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps6e; 30S ribosomal protein S6e
Displaying items 1-30 of 61 in total

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