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sw_10_scaffold_74

Search features with annotation key words

Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_74_1
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(402..620)
DNA (219bp) protein (73aa)
Like-Sm ribonucleoprotein core n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5I9Q9_ACIB4
Like-Sm ribonucleoprotein core; K04796 small nuclear ribonucleoprotein Tax=RBG_16_Euryarchaeota_68_12_curated
Like-Sm ribonucleoprotein core
sw_10_scaffold_74_2
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(999..1415)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VUT2_9EURY
hypothetical protein Tax=RBG_13_Euryarchaeota_31_8_curated
hypothetical protein
sw_10_scaffold_74_3
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

1527..1961
DNA (435bp) protein (145aa)
30S ribosomal protein S8e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXJ1_METFV
30S ribosomal protein S8e
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=523846 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanothermaceae; Methan
sw_10_scaffold_74_4
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

1967..2257
DNA (291bp) protein (97aa)
Signal recognition particle 19 kDa protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WTV1_9EURY
Signal recognition particle 19 kDa protein {ECO:0000256|HAMAP-Rule:MF_00305}; Short=SRP19 {ECO:0000256|HAMAP-Rule:MF_00305};; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasm
ribonucleoprotein complex SRP, Srp19 component
sw_10_scaffold_74_5
unknown

Not on your lists

comp(2254..2868)
DNA (615bp) protein (205aa)

This feature has no annotations

sw_10_scaffold_74_6
Corynebacterium doosanense, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2921..3760
DNA (840bp) protein (280aa)
Formimidoylglutamase {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446}; EC=3.5.3.8 {ECO:0000256|HAMAP-Rule:MF_00737, ECO:0000256|SAAS:SAAS00012446};; Formiminoglutamase {ECO:0000256|HAM
hypothetical protein n=1 Tax=Corynebacterium capitovis RepID=UPI000374E75A
formimidoylglutamase
sw_10_scaffold_74_7
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3764..7426)
DNA (3663bp) protein (1221aa)
PKD domain-containing protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VVY5_9EURY
PKD domain-containing protein Tax=RBG_16_Euryarchaeota_68_13_curated
PKD domain-containing protein
sw_10_scaffold_74_8
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7620..9284
DNA (1665bp) protein (555aa)
methylmalonyl-CoA mutase large subunit (EC:5.4.99.2)
Methylmalonyl-CoA mutase, large subunit {ECO:0000313|EMBL:AEG14790.1}; EC=5.4.99.2 {ECO:0000313|EMBL:AEG14790.1};; TaxID=760568 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae
Methylmalonyl-CoA mutase, large subunit n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CJH0_DESK7
sw_10_scaffold_74_9
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(9376..11055)
DNA (1680bp) protein (560aa)
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_74_10
unknown

Not on your lists

11307..11942
DNA (636bp) protein (212aa)

This feature has no annotations

sw_10_scaffold_74_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11958..12374)
DNA (417bp) protein (139aa)
AIG2 family protein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0KFJ9_9BACT
AIG2 family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
AIG2 family protein
sw_10_scaffold_74_12
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12388..12849)
DNA (462bp) protein (154aa)
NusA family KH domain protein, archaeal n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I869_METCZ
NusA family KH domain-containing protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" so
sw_10_scaffold_74_13
Archaeoglobus veneficus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists


comp(12846..13154)
DNA (309bp) protein (103aa)
50S ribosomal protein L30e n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KNF2_ARCVS
50S ribosomal protein L30
50S ribosomal protein L30e {ECO:0000256|HAMAP-Rule:MF_00481}; TaxID=693661 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus vene
Bac and Arch Kari Finstad (2/5/15)
sw_10_scaffold_74_14
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(13161..15188)
DNA (2028bp) protein (676aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000364B1D3
rpoA2; DNA-directed RNA polymerase subunit A'
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_74_15
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(15189..17972)
DNA (2784bp) protein (928aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) Tax=RBG_16_Euryarchaeota_68_13_curated
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TC03_9EURY
sw_10_scaffold_74_16
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(17969..19786)
DNA (1818bp) protein (606aa)
rpoB1; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase (Fragment) n=2 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7U495_9EURY
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_74_17
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(19783..21360)
DNA (1578bp) protein (526aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EB389
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_74_18
RBG_13_Euryarchaeota_31_8_curated, Euryarchaeota, Archaea

Not on your lists

comp(21353..21610)
DNA (258bp) protein (86aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=RBG_13_Euryarchaeota_31_8_curated
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=RPOH_METM5
sw_10_scaffold_74_trna_2
unknown

Not on your lists

comp(21754..21827)
DNA (74bp)
transferRNA
sw_10_scaffold_74_19

Not on your lists

22102..23268
DNA (1167bp) protein (389aa)
Propanoyl-CoA C-acyltransferase (AtoB) {ECO:0000313|EMBL:AIF09752.1}; EC=2.3.1.9 {ECO:0000313|EMBL:AIF09752.1};; TaxID=1456143 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncult
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Cenarchaeum symbiosum (strain A) RepID=A0RYH3_CENSY
sw_10_scaffold_74_20

Not on your lists

23269..23643
DNA (375bp) protein (125aa)
Protein containing DUF35 n=1 Tax=mine drainage metagenome RepID=T1BS90_9ZZZZ
Putative nucleic acid binding protein {ECO:0000313|EMBL:AIF08030.1}; TaxID=1456108 species="Archaea; Thaumarchaeota; environmental samples.;" source="uncultured marine thaumarchaeote KM3_26_F01.;"
hypothetical protein
sw_10_scaffold_74_21
unknown

Not on your lists

comp(23933..24529)
DNA (597bp) protein (199aa)

This feature has no annotations

sw_10_scaffold_74_22
unknown

Not on your lists

comp(25942..28407)
DNA (2466bp) protein (822aa)

This feature has no annotations

sw_10_scaffold_74_23
Aciduliprofundum boonei, Aciduliprofundum, Euryarchaeota, Archaea

Not on your lists

28982..30748
DNA (1767bp) protein (589aa)
Probable translation initiation factor IF-2 n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IDE8_ACIB4
translation initiation factor aIF-2
Probable translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100}; TaxID=439481 species="Archaea; Euryarchaeota; Aciduliprofundum.;" source="Aciduliprofundum boonei (strain DSM 19572 / T46
sw_10_scaffold_74_24
unknown

Not on your lists

30745..30918
DNA (174bp) protein (58aa)

This feature has no annotations

sw_10_scaffold_74_25
Physcomitrella patens, Physcomitrella, Funariales, Funariidae, Streptophyta, Viridiplantae

Not on your lists

comp(30926..31651)
DNA (726bp) protein (242aa)
Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPQ2_PHYPA
MIP family channel protein
Predicted protein {ECO:0000313|EMBL:EDQ66959.1}; TaxID=3218 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Bryophyta; Bryophytina; Bryopsida; Funariidae; Funariales; Funariaceae; Physco
sw_10_scaffold_74_26
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31766..33985
DNA (2220bp) protein (740aa)
Catalase-peroxidase {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:RU003451}; Short=CP {ECO:0000256|HAMAP-Rule:MF_01961};; EC=1.11.1.21 {ECO:0000256|HAMAP-Rule:MF_01961, ECO:0000256|RuleBase:R
catalase-peroxidase (EC:1.11.1.6)
Catalase-peroxidase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0H6Z5_9EURY
sw_10_scaffold_74_27
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

33982..34509
DNA (528bp) protein (176aa)
Peroxide operon transcriptional regulator n=1 Tax=Lactobacillus coryniformis subsp. coryniformis CECT 5711 RepID=J3JC29_9LACO
fur2; Peroxide operon transcriptional regulator
Transcriptional regulator PerR {ECO:0000313|EMBL:AIS52793.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Therm
sw_10_scaffold_74_28
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

34559..35182
DNA (624bp) protein (208aa)
DNA protection protein DPS n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DN74_9EURY
DNA protection protein DPS {ECO:0000313|EMBL:ELZ36930.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 102
ferritin-like protein
sw_10_scaffold_74_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

35204..35575
DNA (372bp) protein (124aa)
Ferredoxin I n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3A0_HALJB
ferredoxin I
Ferredoxin I {ECO:0000313|EMBL:ADJ15207.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (strain D
Displaying items 1-30 of 52 in total

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