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This organism can only be binned in the context of its binning project PLM3-1_200cm_b2_sep2016. Please contact the project owner (lavik17@gmail.com) to become a member and gain access.

sw_10_scaffold_188_6

Organism: SW_10_Thermoplasmatales_69_26

near complete RP 34 / 55 MC: 6 BSCG 25 / 51 MC: 2 ASCG 38 / 38
Location: comp(8704..9132)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RIB8_ARCPA similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 142.0
  • Bit_score: 233
  • Evalue 1.30e-58
30S ribosomal protein S23 similarity KEGG
DB: KEGG
  • Identity: 80.3
  • Coverage: 142.0
  • Bit_score: 233
  • Evalue 3.60e-59
Tax=BJP_IG2158_Thermoplasmatales_53_16 similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 142.0
  • Bit_score: 239
  • Evalue 2.50e-60

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Taxonomy

BJP_IG2158_Thermoplasmatales_53_16 → Thermoplasmatales → Thermoplasmata → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 429
ATGGCGAACGGATTGAACGCTGCACGCAAGCTGAAGAAGGACCGGAAGAAGTTCCGCTGGTCCGACCGACACTACAAACGCCGCGCGGAGAACCTCCGCGACAAGGCTGACCCGCTCGGTGGCGCGCCCCAAGGCCGGGGTATCGTGATCGAGAAGGTCGGGATCGAGGCCAAGCAGCCGAACTCCGCCATCCGGAAGTGCGTGAAGGTCCAACTCATCAAGAACGGGCGTCAAGTCACCGCCTTCTGCGTGGGTGACGGCGCCATCAACTTCATCGACGAGCACGACGAGGTCCTCATCGAGGGCATCGGCGGCGCCATGGGTCGCTCGTACGGGGACATCCCGGGCGTGCGGTTCAAGGTCGTCAAGGTCAACGGTGTCTCCCTCGAGGAGCTCGTGCTCGGGAAGAAGGAGAAACCGATGCGGTGA
PROTEIN sequence
Length: 143
MANGLNAARKLKKDRKKFRWSDRHYKRRAENLRDKADPLGGAPQGRGIVIEKVGIEAKQPNSAIRKCVKVQLIKNGRQVTAFCVGDGAINFIDEHDEVLIEGIGGAMGRSYGDIPGVRFKVVKVNGVSLEELVLGKKEKPMR*