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sw_10_scaffold_188

Search features with annotation key words

Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_188_1
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(96..2300)
DNA (2205bp) protein (735aa)
Elongation factor 2 n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7T8G9_9EURY
translation elongation factor aEF-2
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_188_2
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2640..4838)
DNA (2199bp) protein (733aa)
CheA signal transduction histidine kinase; K03407 two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] Tax=GWB2_Deltaproteobacteria_55_19_curated
CheA signal transduction histidine kinase id=4594962 bin=GWC2_Deltaproteobacteria_56_8 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
CheA signal transduction histidine kinase
sw_10_scaffold_188_3
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4847..6328)
DNA (1482bp) protein (494aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P0J7_9EURY
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EMA63571.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
methyl-accepting chemotaxis sensory transducer
sw_10_scaffold_188_4
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6333..7328)
DNA (996bp) protein (332aa)
CheW protein id=1708240 bin=GWB2_Proteobacteria_55_19 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
CheW protein; K03408 purine-binding chemotaxis protein CheW Tax=GWB2_Deltaproteobacteria_55_19_curated
chemotaxis signal transduction protein
sw_10_scaffold_188_5
Methanoculleus sp. CAG:1088, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(8037..8699)
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037C2538
SSU ribosomal protein S5e (S7p)
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1262903 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus; environmental sampl
sw_10_scaffold_188_6
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(8704..9132)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RIB8_ARCPA
30S ribosomal protein S23
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_188_7
RBG_13_Actinobacteria_55_18_curated, Actinobacteria, Bacteria

Not on your lists

comp(9420..10037)
DNA (618bp) protein (206aa)
UPI0003D5EAEE related cluster n=1 Tax=unknown RepID=UPI0003D5EAEE
hypothetical protein
hypothetical protein Tax=RBG_13_Actinobacteria_55_18_curated
sw_10_scaffold_188_8
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

10220..11389
DNA (1170bp) protein (390aa)
fbp; Fructose-1,6-bisphosphatase (FBPase V) (fbp) (EC:3.1.3.11)
Fructose-1,6-bisphosphatase (FBPase V) (Fbp) {ECO:0000313|EMBL:ACS32625.1}; EC=3.1.3.11 {ECO:0000313|EMBL:ACS32625.1};; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Therm
Fructose-1,6-bisphosphatase (FBPase V) (Fbp) n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A313_THEGJ
sw_10_scaffold_188_9
unknown

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comp(11736..11981)
DNA (246bp) protein (82aa)

This feature has no annotations

sw_10_scaffold_188_10
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12155..12625)
DNA (471bp) protein (157aa)
Response regulator receiver protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AFS1_NATGS
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Response regulator receiver protein {ECO:0000313|EMBL:ELY50827.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeot
sw_10_scaffold_188_11
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12622..14361)
DNA (1740bp) protein (580aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X1K7_9EURY
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELY55600.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Na
multi-sensor signal transduction histidine kinase
sw_10_scaffold_188_12
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14369..14941)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BV90_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR20357.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mob
heme NO binding domain-containing protein
sw_10_scaffold_188_13
unknown

Not on your lists

comp(15051..16085)
DNA (1035bp) protein (345aa)

This feature has no annotations

sw_10_scaffold_188_14
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16202..16549
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XRN9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY64202.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_10_scaffold_188_15
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16642..16881)
DNA (240bp) protein (80aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; T
Ribonuclease VapC n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I6K5_DESAP
PilT domain-containing protein
Displaying 15 items

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