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sw_10_scaffold_84_26

Organism: SW_10_Thermoplasmatales_69_26

near complete RP 34 / 55 MC: 6 BSCG 25 / 51 MC: 2 ASCG 38 / 38
Location: 23266..23952

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex component Rrp4 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5L6_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 48.9
  • Coverage: 227.0
  • Bit_score: 221
  • Evalue 8.00e-55
exosome complex RNA-binding protein Rrp4 Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 215.0
  • Bit_score: 227
  • Evalue 2.70e-56
rrp4; exosome complex component Rrp4 similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 228.0
  • Bit_score: 224
  • Evalue 2.70e-56

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Taxonomy

RBG_19FT_COMBO_Euryarchaeota_56_21_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 687
TTGTCAAGAGAAGTCGTCGTACCCGGTGATCTGCTCGACGATTCAGGGCAGAAAGAGGCCGGGTCCAACGCGTACAAAGAAGGTTCCGAGGTTTACGCCGAACGCGTCGGGCTCAAGAAGGAGGGCTCCAACCACGTCGAGGTCGTGGCCCTCAGCGGCAAGCGCTACGAGCCCCAACGCGGTGACCTCGTCATCGGGACGATCATCGAGGCCAAGCCCTCGATCTGGTTCCTCGACATCAACGGACCCAGCGACGTCGGTATGCACGTCAACGAGGTCCCCTGGCGCGTCGATTTCGGCGAGACCACGAAGTACCTGGACATCGGCGAGACGGCCCTGATGAAGGTCTACCACGTCGACGAGCAGCGCGAAGCCCAGGTCACGATGAAGGACCGGACCTGTCGCAAGCTCGAAGGCGGAACCACCATCACCGTCCCGCCCAGCAAGGTGCCCCGCATCATCGGACGCCGGGGCTCCATGATCAAGACCATCAAGAACAACACCGACTGCCGGCTCTTCGTCGGCAAGAACGGGGTCATCTGGTTCGACGGCGAGCCCGAGGAGGTCAGTCACGTGCGCGACGCCATCCACATGATCGTCGACCAAGCGCACACCTCGGGTCTCACCGAGCGGGTCGAGACCTTCCTGGACGAAGGCCCCGAAGCAGTCGATCCCCCTACGGAGTGA
PROTEIN sequence
Length: 229
LSREVVVPGDLLDDSGQKEAGSNAYKEGSEVYAERVGLKKEGSNHVEVVALSGKRYEPQRGDLVIGTIIEAKPSIWFLDINGPSDVGMHVNEVPWRVDFGETTKYLDIGETALMKVYHVDEQREAQVTMKDRTCRKLEGGTTITVPPSKVPRIIGRRGSMIKTIKNNTDCRLFVGKNGVIWFDGEPEEVSHVRDAIHMIVDQAHTSGLTERVETFLDEGPEAVDPPTE*