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sw_10_scaffold_84

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_84_1
unknown

Not on your lists

comp(97..252)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_10_scaffold_84_2
Thermoanaerobacter mathranii, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

831..1685
DNA (855bp) protein (285aa)
Transketolase domain protein n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7ARH9_THEM3
transketolase domain-containing protein
Transketolase domain protein {ECO:0000313|EMBL:ADH61521.1}; TaxID=583358 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Therm
sw_10_scaffold_84_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1685..2674
DNA (990bp) protein (330aa)
Transketolase domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUE6_HALUD
Transketolase domain protein
Transketolase domain protein {ECO:0000313|EMBL:ACV11043.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis
sw_10_scaffold_84_4
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3064..3417)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PPK1_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM71502.1}; Flags: Precursor;; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muric
sw_10_scaffold_84_5
unknown

Not on your lists

comp(3479..4852)
DNA (1374bp) protein (458aa)

This feature has no annotations

sw_10_scaffold_84_6
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(4911..6239)
DNA (1329bp) protein (443aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=2 Tax=Methanothermobacter thermautotrophicus RepID=GATB_METTH
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
sw_10_scaffold_84_7
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6236..7531)
DNA (1296bp) protein (432aa)
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-); K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=24643793 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=108502
aatA; aspartyl-tRNA(Asn) amidotransferase subunit A (EC:6.3.5.-)
sw_10_scaffold_84_8
unknown

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comp(7528..7854)
DNA (327bp) protein (109aa)

This feature has no annotations

sw_10_scaffold_84_trna_1
unknown

Not on your lists

7858..7929
DNA (72bp)
transferRNA
sw_10_scaffold_84_9
unknown

Not on your lists

8205..8843
DNA (639bp) protein (213aa)

This feature has no annotations

sw_10_scaffold_84_10
unknown

Not on your lists

8890..9039
DNA (150bp) protein (50aa)

This feature has no annotations

sw_10_scaffold_84_11
unknown

Not on your lists

comp(9036..9350)
DNA (315bp) protein (105aa)

This feature has no annotations

sw_10_scaffold_84_12
Thermoplasmatales archaeon SCGC AB-539-N05, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

9481..11409
DNA (1929bp) protein (643aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TBZ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR74373.1}; TaxID=1198116 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-N05.;"
NCAS0H00950; hypothetical protein
sw_10_scaffold_84_13
unknown

Not on your lists

11434..13725
DNA (2292bp) protein (764aa)

This feature has no annotations

sw_10_scaffold_84_14
unknown

Not on your lists

13806..14078
DNA (273bp) protein (91aa)

This feature has no annotations

sw_10_scaffold_84_15
Methanocaldococcus sp. FS406-22, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

14078..14683
DNA (606bp) protein (202aa)
Transcriptional regulator, ArsR family n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S4S6_METSF
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADC69840.1}; TaxID=644281 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="
sw_10_scaffold_84_16
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(14757..15428)
DNA (672bp) protein (224aa)
Beta-phosphoglucomutase (EC:5.4.2.6)
Beta-phosphoglucomutase n=1 Tax=planctomycete KSU-1 RepID=I3INM9_9PLAN
putative phosphatase/phosphohexomutase Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
sw_10_scaffold_84_17
Methanopyrus kandleri, Methanopyrus, Methanopyrales, Methanopyri, Euryarchaeota, Archaea

Not on your lists

15559..16221
DNA (663bp) protein (221aa)
Uncharacterized conserved protein n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TUS1_METKA
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:AAM02896.1}; TaxID=190192 species="Archaea; Euryarchaeota; Methanopyri; Methanopyrales; Methanopyraceae; Methanopyrus.;" source="Methanopyrus kandle
sw_10_scaffold_84_18
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16380..17273)
DNA (894bp) protein (298aa)
arginase (EC:3.5.3.1)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" sour
Arginase n=1 Tax=Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB 13706 / S10) RepID=J7IQA8_DESMD
sw_10_scaffold_84_19

Not on your lists

17401..18039
DNA (639bp) protein (213aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICY1_ACIB4
Marine sediment metagenome DNA, contig: S01H1_S27015 {ECO:0000313|EMBL:GAG35996.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Radical SAM domain protein
sw_10_scaffold_84_20
unknown

Not on your lists

18036..18296
DNA (261bp) protein (87aa)

This feature has no annotations

sw_10_scaffold_84_21
Methanothermobacter sp. CaT2, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists


comp(18313..19671)
DNA (1359bp) protein (453aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=866790 species="Archaea; Eur
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Methanothermobacter thermautotrophicus CaT2 RepID=T2GGS7_METTF
sw_10_scaffold_84_trna_2
unknown

Not on your lists

19803..19875
DNA (73bp)
transferRNA
sw_10_scaffold_84_22
unknown

Not on your lists

20185..21273
DNA (1089bp) protein (363aa)

This feature has no annotations

sw_10_scaffold_84_23
unknown

Not on your lists

21334..21597
DNA (264bp) protein (88aa)

This feature has no annotations

sw_10_scaffold_84_24
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

21775..22548
DNA (774bp) protein (258aa)
proteasome subunit alpha (EC:3.4.25.1)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000370E71F
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_84_25
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


22558..23259
DNA (702bp) protein (234aa)
RNA-associated protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AMG5_9EURY
ribosome maturation protein SBDS-like protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
sw_10_scaffold_84_26
RBG_19FT_COMBO_Euryarchaeota_56_21_curated, Euryarchaeota, Archaea

Not on your lists

23266..23952
DNA (687bp) protein (229aa)
Exosome complex component Rrp4 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T5L6_9EURY
exosome complex RNA-binding protein Rrp4 Tax=RBG_19FT_COMBO_Euryarchaeota_56_21_curated
rrp4; exosome complex component Rrp4
sw_10_scaffold_84_27
Candidatus Methanoplasma termitum, Candidatus Methanoplasma, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

23958..24734
DNA (777bp) protein (259aa)
exosome complex component Rrp41 (EC:3.1.13.-)
Exosome complex component Rrp41 {ECO:0000256|HAMAP-Rule:MF_00591}; EC=3.1.13.- {ECO:0000256|HAMAP-Rule:MF_00591};; TaxID=1577791 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccale
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00037D8B2C
sw_10_scaffold_84_28
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

24734..25522
DNA (789bp) protein (263aa)
Exosome complex component Rrp42 n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7U9L3_9EURY
Exosome complex component Rrp42 {ECO:0000256|HAMAP-Rule:MF_00622}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F2
Exosome complex exonuclease 2
Displaying items 1-30 of 40 in total

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