ggKbase | organisms

Consensus taxonomy: Nanohaloarchaea → Nanohaloarchaeota → Archaea

Taxonomy override: Nanohaloarchaea

Metagenomic Context

Parent: SW_10_UNK

Properties

Avg. coverage: 5.86 Longest contig: 15.13 Kbp Bin length: 541.43 Kbp GC content: 42.84 %

Contigs count: 262 Features count: 873 rRNAs count: 0 tRNAs count: 9

Genome completeness

partial RP 25 / 55 MC: 7 BSCG 13 / 51 MC: 1 ASCG 21 / 38 MC: 10

Displaying items 151-200 of 262 in total

contig	# features	sequence size	GC content (%)	Cov	Coding Density (%)
sw_10_scaffold_14855 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	1236 bp	45.31	5.02	99.76
sw_10_scaffold_12794 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	1367 bp	42.21	5.05	97.22
sw_10_scaffold_6679 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	2080 bp	44.13	6.44	98.51
sw_10_scaffold_19018 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1035 bp	43.29	6.38	88.70
sw_10_scaffold_9446 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	1662 bp	42.06	5.72	87.91
sw_10_scaffold_13728 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1304 bp	42.71	5.67	99.85
sw_10_scaffold_16702 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1136 bp	45.42	5.46	100.09
sw_10_scaffold_15115 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1221 bp	44.96	5.16	96.56
sw_10_scaffold_12352 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	1398 bp	42.78	7.01	96.14
sw_10_scaffold_16061 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1171 bp	44.15	4.27	45.09
sw_10_scaffold_16486 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	1707 bp	45.28	5.68	80.84
sw_10_scaffold_14666 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1247 bp	40.66	6.90	100.08
sw_10_scaffold_8087 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	1844 bp	45.23	4.50	90.13
sw_10_scaffold_18562 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1054 bp	38.05	3.51	103.60
sw_10_scaffold_13296 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1332 bp	43.24	3.83	61.49
sw_10_scaffold_14217 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	1274 bp	40.35	4.08	91.13
sw_10_scaffold_4414 Species: Candidatus Haloredivivus sp. G17 (100%)	2	2689 bp	45.56	6.99	98.07
sw_10_scaffold_5336 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	2387 bp	45.50	6.87	100.29
sw_10_scaffold_15141 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1220 bp	44.84	5.49	95.16
sw_10_scaffold_9024 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1712 bp	42.06	6.78	52.75
sw_10_scaffold_9489 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1656 bp	45.11	5.74	76.99
sw_10_scaffold_18818 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1042 bp	42.03	4.61	96.74
sw_10_scaffold_8807 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1741 bp	38.08	4.25	95.63
sw_10_scaffold_14470 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1258 bp	40.14	7.23	89.19
sw_10_scaffold_15392 Species: Candidatus Haloredivivus sp. G17 (100%)	2	1205 bp	44.32	6.56	90.87
sw_10_scaffold_25544 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1343 bp	40.88	4.99	89.13
sw_10_scaffold_7893 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	1872 bp	44.82	6.68	95.35
sw_10_scaffold_17260 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	1111 bp	43.74	7.02	76.69
sw_10_scaffold_13784 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1300 bp	43.85	5.00	93.46
sw_10_scaffold_12173 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1412 bp	42.21	3.26	68.63
sw_10_scaffold_19778 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	1004 bp	43.92	3.59	99.80
sw_10_scaffold_11722 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1446 bp	44.40	6.36	81.33
sw_10_scaffold_12651 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	1377 bp	38.42	3.49	99.56
sw_10_scaffold_5150 Species: Candidatus Haloredivivus sp. G17 (50%)	2	2437 bp	40.38	6.61	74.85
sw_10_scaffold_18855 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	1041 bp	44.00	3.46	91.35
sw_10_scaffold_11736 Species: Candidatus Haloredivivus sp. G17 (100%)	2	1445 bp	44.71	7.20	99.86
sw_10_scaffold_12202 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1410 bp	45.11	3.90	100.21
sw_10_scaffold_21520 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1785 bp	44.31	5.77	100.34
sw_10_scaffold_15919 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	1178 bp	41.68	4.50	96.01
sw_10_scaffold_16340 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1155 bp	38.27	3.55	64.94
sw_10_scaffold_15695 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1190 bp	41.18	3.36	50.17
sw_10_scaffold_19364 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1020 bp	45.10	3.73	100.00
sw_10_scaffold_10150 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1588 bp	42.44	6.55	99.94
sw_10_scaffold_5189 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	2426 bp	42.00	6.84	90.40
sw_10_scaffold_23665 Species: Candidatus Haloredivivus sp. G17 (50%)	2	1239 bp	37.93	3.31	98.31
sw_10_scaffold_9340 Species: Candidatus Nanosalinarum sp. J07AB56 (50%)	2	1673 bp	37.72	4.66	94.68
sw_10_scaffold_15946 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1176 bp	44.81	5.27	100.26
sw_10_scaffold_17058 Species: Candidatus Nanosalina sp. J07AB43 (50%)	2	1120 bp	43.48	5.80	81.70
sw_10_scaffold_38638 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	1016 bp	42.91	6.30	56.10
sw_10_scaffold_17061 Species: Candidatus Nanosalina sp. J07AB43 (100%)	2	1120 bp	44.64	4.02	97.77

Displaying items 151-200 of 262 in total

SW_10_Nanohaloarchaea_43_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

SW_10_Nanohaloarchaea_43_6

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.

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