ggKbase home page

sw_10_scaffold_197

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_197_1
Rivularia sp. PCC 7116, Rivularia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
Photosystem II D2 protein {ECO:0000256|HAMAP-Rule:MF_01383}; Short=PSII D2 protein {ECO:0000256|HAMAP-Rule:MF_01383};; EC=1.10.3.9 {ECO:0000256|HAMAP-Rule:MF_01383};; Photosystem Q(A) protein {ECO:000
Photosystem II D2 protein n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RKI7_9CYAN
Photosystem II DII subunit, Q(A) protein
sw_10_scaffold_197_2
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

456..1022
DNA (567bp) protein (189aa)
Photosystem I assembly protein Ycf4 n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YC50_HALP7
photosystem I assembly Ycf4
Photosystem I assembly protein Ycf4 {ECO:0000256|HAMAP-Rule:MF_00437}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus
sw_10_scaffold_197_3
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1134..1844
DNA (711bp) protein (237aa)
Peptidyl-prolyl cis-trans isomerase cyclophilin type n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YDQ0_HALP7
cyclophilin type peptidyl-prolyl cis-trans isomerase
Peptidyl-prolyl cis-trans isomerase cyclophilin type {ECO:0000313|EMBL:AFZ44535.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece clu
sw_10_scaffold_197_4
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

1958..3088
DNA (1131bp) protein (377aa)
Beta-ketoacyl synthase, C-terminal domain protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VPT3_9CYAN
Beta-ketoacyl synthase, C-terminal domain protein {ECO:0000313|EMBL:EDX75932.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleo
3-oxoacyl-ACP synthase
sw_10_scaffold_197_5
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3717..5267
DNA (1551bp) protein (517aa)
Putative uncharacterized protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VT79_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX74940.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
flavin-dependent dehydrogenase
sw_10_scaffold_197_6
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

5304..5753
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XRI6_STAC7
protein of unknown function DUF29
Uncharacterized protein {ECO:0000313|EMBL:AFZ34666.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
sw_10_scaffold_197_7
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

5760..6575
DNA (816bp) protein (272aa)
Putative uncharacterized protein n=1 Tax=Moorea producens 3L RepID=F4XJR6_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGJ35346.1}; TaxID=489825 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
hypothetical protein
sw_10_scaffold_197_8
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(6666..7124)
DNA (459bp) protein (153aa)
Polyketide cyclase / dehydrase and lipid transport n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W9B6_9CYAN
polyketide cyclase/dehydrase and lipid transport
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:AFZ16411.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microco
sw_10_scaffold_197_9
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7499..9223
DNA (1725bp) protein (575aa)
Conserved TM helix family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4W2N4_9CYAN
Conserved TM helix family {ECO:0000313|EMBL:EDX71622.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplaste
hypothetical protein
sw_10_scaffold_197_10
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9384..9644)
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI00035C540E
Putative uncharacterized protein {ECO:0000313|EMBL:EDX70715.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthon
hypothetical protein
sw_10_scaffold_197_11
unknown

Not on your lists

comp(9748..9927)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_10_scaffold_197_12
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9949..11259)
DNA (1311bp) protein (437aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;
PAS fold family n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VPQ1_9CYAN
PAS domain-containing protein
sw_10_scaffold_197_13
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

11514..12998
DNA (1485bp) protein (495aa)
Glycolate oxidase, subunit GlcD n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9WCY5_9CYAN
glycolate oxidase subunit GlcD
Glycolate oxidase, subunit GlcD {ECO:0000313|EMBL:AFZ18270.1}; TaxID=1173027 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus sp. PCC 7113.;
sw_10_scaffold_197_14
Stanieria cyanosphaera, Stanieria, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(13148..13822)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XR60_STAC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ35090.1}; TaxID=111780 species="Bacteria; Cyanobacteria; Pleurocapsales; Stanieria.;" source="Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437).;"
sw_10_scaffold_197_15
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(13941..14768)
DNA (828bp) protein (276aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VQ48_9CYAN
dihydrodipicolinate reductase
sw_10_scaffold_197_16
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(14825..17077)
DNA (2253bp) protein (751aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMA
glycogen branching protein (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VJ70_9CYAN
sw_10_scaffold_197_17
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17766..18203
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W6E6_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ15332.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
sw_10_scaffold_197_18
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18357..18590
DNA (234bp) protein (78aa)
Putative cation transport regulator n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TQI7_9CYAN
putative cation transport regulator
Putative cation transport regulator {ECO:0000313|EMBL:AFY84426.1}; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata
sw_10_scaffold_197_19
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18722..21955)
DNA (3234bp) protein (1078aa)
RND transporter, HAE1/HME family, permease protein n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VPG4_9CYAN
RND transporter, HAE1/HME family, permease protein {ECO:0000313|EMBL:EDX76013.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Cole
cation/multidrug efflux pump
sw_10_scaffold_197_20
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(22071..23555)
DNA (1485bp) protein (495aa)
Efflux transporter, RND family, MFP subunit, putative n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VPG5_9CYAN
Efflux transporter, RND family, MFP subunit, putative {ECO:0000313|EMBL:EDX76112.1}; TaxID=118168 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="C
RND family efflux transporter MFP subunit
sw_10_scaffold_197_21
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

23945..25561
DNA (1617bp) protein (539aa)
hypothetical protein n=1 Tax=Fischerella muscicola RepID=UPI0003076944
Chemotaxis protein {ECO:0000313|EMBL:KIJ81726.1}; TaxID=1233231 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
methyl-accepting chemotaxis sensory transducer
sw_10_scaffold_197_22
Lyngbya aestuarii, Lyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(25575..25982)
DNA (408bp) protein (136aa)
Mutator mutT family protein {ECO:0000313|EMBL:ERT04726.1}; EC=3.6.1.- {ECO:0000313|EMBL:ERT04726.1};; TaxID=1348334 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Lyngbya.;"
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
Mutator mutT family protein n=1 Tax=Lyngbya aestuarii BL J RepID=U7QDC7_9CYAN
sw_10_scaffold_197_23
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(26252..26608)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Crinalium epipsammum PCC 9333 RepID=K9W527_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ14530.1}; TaxID=1173022 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
sw_10_scaffold_197_24
unknown

Not on your lists

comp(27025..27642)
DNA (618bp) protein (206aa)

This feature has no annotations

Displaying 24 items

View Taxonomy