ggKbase home page

sw_10_scaffold_228

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_228_1
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3..278
DNA (276bp) protein (92aa)
Carbon dioxide concentrating mechanism/carboxysome shell protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KPP8_9SYNC
Carbon dioxide-concentrating protein CcmK {ECO:0000313|EMBL:KJH73456.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CE
ccmK; carbon dioxide concentrating mechanism protein CcmK
sw_10_scaffold_228_2
Nostoc punctiforme, Nostoc, Nostocales, Cyanobacteria, Bacteria

Not on your lists

285..587
DNA (303bp) protein (101aa)
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J9Z1_NOSP7
ethanolamine utilization protein EutN/carboxysome structural protein Ccml
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml {ECO:0000313|EMBL:ACC82668.1}; TaxID=63737 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc
sw_10_scaffold_228_3
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

671..1987
DNA (1317bp) protein (439aa)
carbonate dehydratase (EC:4.2.1.1)
Carbonate dehydratase {ECO:0000313|EMBL:AFY86540.1}; EC=4.2.1.1 {ECO:0000313|EMBL:AFY86540.1};; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidi
Carbonate dehydratase n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TVE3_9CYAN
sw_10_scaffold_228_4
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2113..2637
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Synechocystis sp. PCC 7509 RepID=L8KTT4_9SYNC
Uncharacterized protein {ECO:0000313|EMBL:KJH73453.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
carbon dioxide concentrating mechanism protein
sw_10_scaffold_228_5
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

2697..3473
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0002DCC8CF
Microcompartment protein {ECO:0000313|EMBL:KJH73452.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA595.;"
microcompartments protein
sw_10_scaffold_228_6
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3519..4172)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Acaryochloris marina (strain MBIC 11017) RepID=B0C722_ACAM1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW28861.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 1
sw_10_scaffold_228_7
Limnoraphis robusta, Limnoraphis, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(4256..4585)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000346F3C8
Carbon dioxide-concentrating protein CcmK {ECO:0000313|EMBL:KKD35682.1}; TaxID=1637645 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Limnoraphis.;" source="Limnoraphis robu
ccmK; carbon dioxide concentrating mechanism protein CcmK
sw_10_scaffold_228_8
Anabaena variabilis, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4678..4986)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034CDFFB
microcompartments protein
Microcompartments protein {ECO:0000313|EMBL:ABA24306.1}; TaxID=240292 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena variabilis (strain ATCC 29413 / PCC 7937).
sw_10_scaffold_228_9
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5029..5622)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003498639
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN13473.1}; TaxID=497965 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
sw_10_scaffold_228_10
unknown

Not on your lists

comp(5671..5850)
DNA (180bp) protein (60aa)

This feature has no annotations

sw_10_scaffold_228_11
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

6355..7884
DNA (1530bp) protein (510aa)
Nitrite extrusion protein, nitrite facilitator n=1 Tax=Rivularia sp. PCC 7116 RepID=K9RM86_9CYAN
nitrite transporter
Nitrite transporter {ECO:0000313|EMBL:AFZ44559.1}; Flags: Precursor;; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Haloth
sw_10_scaffold_228_12
Microcoleus sp. PCC 7113, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7906..10137
DNA (2232bp) protein (744aa)
Anaerobic dehydrogenase, typically selenocysteine-containing {ECO:0000313|EMBL:AFZ16064.1}; EC=1.7.7.2 {ECO:0000313|EMBL:AFZ16064.1};; Flags: Precursor;; TaxID=1173027 species="Bacteria; Cyanobacteria
anaerobic dehydrogenase (EC:1.7.7.2)
Anaerobic dehydrogenase, typically selenocysteine-containing n=1 Tax=Microcoleus sp. PCC 7113 RepID=K9W8I6_9CYAN
sw_10_scaffold_228_13
unknown

Not on your lists

comp(10257..10541)
DNA (285bp) protein (95aa)

This feature has no annotations

sw_10_scaffold_228_14
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

10675..12117
DNA (1443bp) protein (481aa)
Cl-channel voltage-gated family protein n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9PXR7_9CYAN
Cl-channel voltage-gated family protein
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:AFY38280.1}; TaxID=111781 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. P
sw_10_scaffold_228_15
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

12427..12879
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T9A4_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY79003.1}; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocapsa sp. PCC 7327.;"
sw_10_scaffold_228_16
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(13289..14152)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=filamentous cyanobacterium ESFC-1 RepID=UPI00035E7711
Transposase {ECO:0000313|EMBL:KIF33224.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
transposase
sw_10_scaffold_228_17
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(14313..14597)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EMN5_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF85948.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
sw_10_scaffold_228_18
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

14691..16553
DNA (1863bp) protein (621aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; TaxID=1245923 species
Apolipoprotein N-acyltransferase n=1 Tax=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) RepID=B2J2D7_NOSP7
apolipoprotein N-acyltransferase
sw_10_scaffold_228_19
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(16591..17442)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI000305A7E9
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AFZ27923.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
sw_10_scaffold_228_20
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(17408..17779)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Spirulina subsalsa RepID=UPI0002F5D389
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AFZ27923.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
sw_10_scaffold_228_21
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(17858..18214)
DNA (357bp) protein (119aa)
DNA polymerase beta domain protein region n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YEE5_HALP7
DNA polymerase beta domain-containing protein region
DNA polymerase beta domain protein region {ECO:0000313|EMBL:AFZ44468.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Hal
sw_10_scaffold_228_22
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(18204..18605)
DNA (402bp) protein (134aa)
HEPN domain protein n=1 Tax=Halothece sp. (strain PCC 7418) RepID=K9YC75_HALP7
HEPN domain-containing protein
HEPN domain protein {ECO:0000313|EMBL:AFZ44469.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothece sp. (strain PCC
sw_10_scaffold_228_23
Scytonema millei, Scytonema, Nostocales, Cyanobacteria, Bacteria

Not on your lists

18962..19207
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5C0Q3_NITHN
Transposase {ECO:0000313|EMBL:KIF24505.1}; TaxID=1245923 species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema millei VB511283.;"
hypothetical protein
Displaying 23 items

View Taxonomy