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sw_10_scaffold_1225

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1225_1
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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208..2070
DNA (1863bp) protein (621aa)
Surface antigen n=1 Tax=Methanosarcina mazei RepID=Q977V5_METMZ
surface layer protein
GTG start codon {ECO:0000313|EMBL:CAA59200.1}; Flags: Fragment;; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosa
sw_10_scaffold_1225_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2082..2672
DNA (591bp) protein (197aa)
Pyrrolo-quinoline quinone n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQ73_HALUD
Pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ACV11817.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (st
sw_10_scaffold_1225_3
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2906..3742
DNA (837bp) protein (279aa)
Oxidoreductase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HLW6_9EURY
Oxidoreductase {ECO:0000313|EMBL:ELZ85545.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
aldo/keto reductase
sw_10_scaffold_1225_4

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3817..4218
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SLW4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06236.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_10_scaffold_1225_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4219..4392)
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:EMA29049.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_10_scaffold_1225_6
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4432..5061)
DNA (630bp) protein (210aa)
Conserved domain protein n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PME6_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB43235.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina v
sw_10_scaffold_1225_7

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5414..5671
DNA (258bp) protein (86aa)
transcriptional regulator, AsnC family id=24622306 bin=Halonotius_J07HN6 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halonotius_J07HN6
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ESS08172.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
trh2; transcription regulator
sw_10_scaffold_1225_8
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5942..6871
DNA (930bp) protein (310aa)
ndhF; potential NADH-quinone oxidoreductase subunit 5 (EC:1.6.99.5)
Putative NADH-quinone oxidoreductase subunit 5 n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9V3Y4_HALBP
Putative NADH-quinone oxidoreductase subunit 5 {ECO:0000313|EMBL:ELY31716.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halo
Displaying 8 items

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