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sw_10_scaffold_1871

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1871_1
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1274)
DNA (1272bp) protein (424aa)
hypothetical protein; K09744 hypothetical protein id=24623735 bin=Haloquadratum_J07HQX50 species=Haloquadratum sp. J07HQX50 genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_J07HQX50
Uncharacterized protein {ECO:0000313|EMBL:ERG99366.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum sp. J07HQX50.;
hypothetical protein
sw_10_scaffold_1871_2
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1436..2755)
DNA (1320bp) protein (440aa)
rad25c; DNA repair helicase Rad25 (EC:3.6.4.12)
DNA or RNA helicase of superfamily II n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NPI8_9EURY
DNA or RNA helicase of superfamily II {ECO:0000313|EMBL:ERG99365.1}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum
sw_10_scaffold_1871_3

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comp(2966..3574)
DNA (609bp) protein (203aa)
Transposase, IS605 OrfB family, central region n=1 Tax=uncultured archaeon A07HR60 RepID=V4XPE2_9ARCH
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ESS10324.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
IS1341-type transposase
sw_10_scaffold_1871_4

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comp(3586..5844)
DNA (2259bp) protein (753aa)
Putative hydrophobe/Amphiphile Efflux-3 (HAE3) family protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCW6_9ARCH
Putative hydrophobe/Amphiphile Efflux-3 (HAE3) family protein {ECO:0000313|EMBL:ESS05794.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
efflux transporter
sw_10_scaffold_1871_5
unknown

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6236..6538
DNA (303bp) protein (101aa)

This feature has no annotations

sw_10_scaffold_1871_6
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7493..8080
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Halarchaeum acidiphilum RepID=UPI000370E9A8
Transcriptional regulator, TetR family {ECO:0000313|EMBL:GAD52100.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
transcriptional regulator, TetR family
sw_10_scaffold_1871_7
Chlorobium ferrooxidans, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

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comp(8141..9028)
DNA (888bp) protein (296aa)
SAM (And some other nucleotide) binding motif n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YTQ9_9CHLB
SAM (And some other nucleotide) binding motif {ECO:0000313|EMBL:EAT59841.1}; TaxID=377431 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.
type 12 methyltransferase
sw_10_scaffold_1871_8
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9162..10220
DNA (1059bp) protein (353aa)
Geranylgeranyl hydrogenase n=2 Tax=Haloarcula RepID=M0K4C9_9EURY
Geranylgeranyl hydrogenase {ECO:0000313|EMBL:EMA20303.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae AT
bchP; geranylgeranyl hydrogenase
Displaying 8 items

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