ggKbase home page

sw_10_scaffold_1769

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1769_1
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..457)
DNA (456bp) protein (152aa)
TrkA-N domain-containing protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZK91_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:ELY85593.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM
TrkA-N domain-containing protein
sw_10_scaffold_1769_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(507..986)
DNA (480bp) protein (160aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRB5_HALUD
CDP-alcohol phosphatidyltransferase
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ACV10552.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus uta
sw_10_scaffold_1769_3
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1068..3011)
DNA (1944bp) protein (648aa)
ATPase AAA n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MQW4_9EURY
ATPase AAA {ECO:0000313|EMBL:EMA47134.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
AAA ATPase
sw_10_scaffold_1769_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2968..3243)
DNA (276bp) protein (92aa)
ATPase AAA (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:ACV47894.1}; EC=3.6.4.6 {ECO:0000313|EMBL:ACV47894.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
AAA family ATPase, CDC48 subfamily n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P472_HALMD
sw_10_scaffold_1769_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3370..4539
DNA (1170bp) protein (390aa)
UPF0272 protein HacjB3_04490 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8V4_HALJB
hypothetical protein
UPF0272 protein HacjB3_04490 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccu
sw_10_scaffold_1769_6
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

4582..5154
DNA (573bp) protein (191aa)
UPF0200 protein Mmah_0349 n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E9N0_METMS
Uncharacterized protein conserved in archaea {ECO:0000313|EMBL:AKG91565.1}; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobu
hypothetical protein
sw_10_scaffold_1769_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5521..6093)
DNA (573bp) protein (191aa)
HGPRTase-like protein {ECO:0000256|HAMAP-Rule:MF_01467}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_01467};; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natron
adenine phosphoribosyltransferase (EC:2.4.2.7)
HGPRTase-like protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XEX4_9EURY
sw_10_scaffold_1769_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6114..7190)
DNA (1077bp) protein (359aa)
phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase (EC:6.3.2.5)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NTU7_9EURY
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase {ECO:0000313|EMBL:EMA60030.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae;
sw_10_scaffold_1769_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7212..7862
DNA (651bp) protein (217aa)
Polyketide cyclase / dehydrase and lipid transport n=1 Tax=Halogranum salarium B-1 RepID=J3JGR9_9EURY
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:EJN60374.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salar
hypothetical protein
sw_10_scaffold_1769_10
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7870..8463)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halonotius sp. J07HN4 RepID=U1NQ71_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH05890.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
hypothetical protein
sw_10_scaffold_1769_11
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8649..9536)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0ECU1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ44697.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_10_scaffold_1769_12
unknown

Not on your lists

9582..9785
DNA (204bp) protein (68aa)

This feature has no annotations

sw_10_scaffold_1769_13
Methanohalobium evestigatum, Methanohalobium, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10049..11392
DNA (1344bp) protein (448aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8M0_METEZ
adenylosuccinate lyase
sw_10_scaffold_1769_14
unknown

Not on your lists

comp(11475..12206)
DNA (732bp) protein (244aa)

This feature has no annotations

sw_10_scaffold_1769_15
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12359..13372)
DNA (1014bp) protein (338aa)
Saccharopine dehydrogenase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDL6_9EURY
hypothetical protein
Probable oxidoreductase (Homolog to saccharopine dehydrogenase) {ECO:0000313|EMBL:CAP14600.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacter
sw_10_scaffold_1769_16
unknown

Not on your lists

13402..14094
DNA (693bp) protein (231aa)

This feature has no annotations

sw_10_scaffold_1769_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14692..14913
DNA (222bp) protein (74aa)
hypothetical protein id=24646001 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10217.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_1769_18
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15117..15929
DNA (813bp) protein (271aa)
NAD+ synthase {ECO:0000313|EMBL:AKH98439.1}; EC=6.3.1.5 {ECO:0000313|EMBL:AKH98439.1};; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeu
NAD synthetase (EC:6.3.1.5)
NH(3)-dependent NAD(+) synthetase n=1 Tax=uncultured archaeon A07HN63 RepID=V4XZN9_9ARCH
sw_10_scaffold_1769_19
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(16050..16643)
DNA (594bp) protein (198aa)
Uracil-DNA glycosylase {ECO:0000313|EMBL:ACS34316.1}; EC=3.2.2.- {ECO:0000313|EMBL:ACS34316.1};; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcu
Uracil-DNA glycosylase n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=C5A1P7_THEGJ
Uracil-DNA glycosylase
sw_10_scaffold_1769_20
unknown

Not on your lists

16696..17451
DNA (756bp) protein (252aa)

This feature has no annotations

sw_10_scaffold_1769_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17535..18461
DNA (927bp) protein (309aa)
tpa06; transport ATPase 6 ( substrate arsenite) (EC:3.6.3.-)
ArsA family ATPase {ECO:0000313|EMBL:CAI48782.1}; EC=3.6.-.- {ECO:0000313|EMBL:CAI48782.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
ArsA family ATPase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISV3_NATPD
sw_10_scaffold_1769_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18578..19261)
DNA (684bp) protein (228aa)
Type 11 methyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1P0_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:EMA51448.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
Methyltransferase type 11
sw_10_scaffold_1769_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19265..19831)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D054_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28850.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
transposase, IS605 OrfB family, central region
sw_10_scaffold_1769_24
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19800..20561)
DNA (762bp) protein (254aa)
transposase IS1341 n=1 Tax=Halorubrum sp. T3 RepID=UPI0003617D97
IS1341-type transposase (TCE32) {ECO:0000313|EMBL:ELY54944.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyt
IS1341-type transposase (TCE32)
Displaying 24 items

View Taxonomy