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sw_10_scaffold_2663

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Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_2663_1
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3..812
DNA (810bp) protein (270aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola
2-methylcitrate synthase/citrate synthase II (EC:2.3.3.1)
Citrate synthase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D6K3_HALXS
sw_10_scaffold_2663_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(860..1966)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D8I8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ31143.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_10_scaffold_2663_3
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2085..2462
DNA (378bp) protein (126aa)
OsmC family protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L4Q5_9EURY
OsmC family protein {ECO:0000313|EMBL:EMA28552.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
OsmC family protein
sw_10_scaffold_2663_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2549..3385)
DNA (837bp) protein (279aa)
Fructose-1,6-bisphosphatase class 1 {ECO:0000256|HAMAP-Rule:MF_01855}; Short=FBPase class 1 {ECO:0000256|HAMAP-Rule:MF_01855};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01855};; D-fructose-1,6-bisphosph
d-fructose 1,6-bisphosphatase (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHV2_9EURY
sw_10_scaffold_2663_5
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3487..4272)
DNA (786bp) protein (262aa)
fba1; fructose-bisphosphate aldolase, class I (EC:4.1.2.13)
Fructose-bisphosphate aldolase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W6B1_9EURY
Fructose-bisphosphate aldolase {ECO:0000313|EMBL:ELY43878.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifa
sw_10_scaffold_2663_6
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4269..5528)
DNA (1260bp) protein (420aa)
Transporter n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPZ8_METH6
Sodium:neurotransmitter symporter family protein, putative
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (str
sw_10_scaffold_2663_7
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6071..6970
DNA (900bp) protein (300aa)
Magnesium and cobalt transport protein CorA n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GAM2_9EURY
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense
magnesium and cobalt transport protein CorA rbh
sw_10_scaffold_2663_trna_1
unknown

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7022..7097
DNA (76bp)
transferRNA
sw_10_scaffold_2663_8
unknown

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7432..7944
DNA (513bp) protein (171aa)

This feature has no annotations

sw_10_scaffold_2663_9
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7944..10205
DNA (2262bp) protein (754aa)
amtB; ammonium transporter id=24621571 bin=Halonotius_J07HN6 species=unknown genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Ammonia permease {ECO:0000313|EMBL:ERH02002.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
amtB; transport protein (probable substrate ammonium)
sw_10_scaffold_2663_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10375..11448
DNA (1074bp) protein (358aa)
Major facilitator superfamily MFS_1 n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJD0_9EURY
major facilitator superfamily MFS_1
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CCQ33587.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus ti
sw_10_scaffold_2663_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11460..12491
DNA (1032bp) protein (344aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
Wyosine base formation domain protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5Y0_HALJB
Wyosine base formation domain-containing protein
sw_10_scaffold_2663_12
unknown

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comp(12548..12784)
DNA (237bp) protein (79aa)

This feature has no annotations

sw_10_scaffold_2663_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12867..14192
DNA (1326bp) protein (442aa)
Major facilitator superfamily MFS_1 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPL1_9EURY
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EFW93494.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus p
sugar phosphate permease
sw_10_scaffold_2663_14
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14805..15614)
DNA (810bp) protein (270aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTK4_9EURY
Chromosome segregation protein ScpA {ECO:0000313|EMBL:KDE57263.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp
chromosome segregation protein ScpA
sw_10_scaffold_2663_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15580..17697)
DNA (2118bp) protein (706aa)
Chromosome partition protein Smc n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTK5_9EURY
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
chromosome segregation protein SMC
Displaying 16 items

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